Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-sprA1AS/-
Location 960807..960968 Replicon chromosome
Accession NZ_LR134269
Organism Staphylococcus warneri strain NCTC11044

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag EL082_RS04785 Protein ID WP_126474883.1
Coordinates 960807..960902 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 960934..960968 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EL082_RS04775 956778..959711 + 2934 WP_103286322.1 AAA family ATPase -
EL082_RS04780 959711..960652 + 942 WP_002466800.1 3'-5' exoribonuclease YhaM -
EL082_RS04785 960807..960902 + 96 WP_126474883.1 type I toxin-antitoxin system Fst family toxin Toxin
- 960934..960968 - 35 - - Antitoxin
EL082_RS04790 961054..962046 - 993 WP_002466825.1 peptidylprolyl isomerase -
EL082_RS04795 962224..962781 - 558 WP_002466819.1 DUF3267 domain-containing protein -
EL082_RS04800 962976..963347 - 372 WP_002452114.1 YtxH domain-containing protein -
EL082_RS04805 963425..963850 - 426 WP_002466803.1 HIT family protein -
EL082_RS04810 963982..964722 + 741 WP_002466806.1 ABC transporter ATP-binding protein -
EL082_RS04815 964715..965938 + 1224 WP_049416178.1 ABC transporter permease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3601.25 Da        Isoelectric Point: 8.0615

>T287409 WP_126474883.1 NZ_LR134269:960807-960902 [Staphylococcus warneri]
MTEIFVHIATTVISGCIVTLFAQWLRHRNDK

Download         Length: 96 bp

Antitoxin


Download         Length: 35 bp

>AT287409 NZ_LR134269:c960968-960934 [Staphylococcus warneri]
ACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References