Detailed information of TA system TA287354

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): SprA2-sprA1AS/-
• Location: 972497..972658
• Replicon: chromosome
• Accession: NZ_LR134244
• Organism: Staphylococcus warneri strain NCTC7291

Toxin (Protein)

• Gene name: SprA2
• Uniprot ID: -
• Locus tag: EL075_RS04805
• Protein ID: WP_015364873.1
• Coordinates: 972497..972592 (+)
• Length: 32 a.a.

Antitoxin (RNA)

Gene name	sprA1AS
Locus tag	-
Coordinates	972624..972658 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
EL075_RS04795	968468..971401	+	2934	WP_126403146.1	AAA family ATPase	-
EL075_RS04800	971401..972342	+	942	WP_002466800.1	3'-5' exoribonuclease YhaM	-
EL075_RS04805	972497..972592	+	96	WP_015364873.1	type I toxin-antitoxin system Fst family toxin	Toxin
-	972624..972658	-	35	-	-	Antitoxin
EL075_RS04810	972744..973736	-	993	WP_126403147.1	peptidylprolyl isomerase	-
EL075_RS04815	973914..974471	-	558	WP_002466819.1	DUF3267 domain-containing protein	-
EL075_RS04820	974666..975037	-	372	WP_002452114.1	YtxH domain-containing protein	-
EL075_RS04825	975115..975540	-	426	WP_002466803.1	HIT family protein	-
EL075_RS04830	975672..976412	+	741	WP_002466806.1	ABC transporter ATP-binding protein	-
EL075_RS04835	976405..977628	+	1224	WP_002466814.1	ABC transporter permease	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 32 a.a.
• Molecular weight: 3610.26 Da
• Isoelectric Point: 8.0878

>T287354 WP_015364873.1 NZ_LR134244:972497-972592 [Staphylococcus warneri]
MTEIFVHIATTVISGCIVTLFAHWLRHRNDK

Nucleotide

• Length: 96 bp

Antitoxin

Nucleotide

• Length: 35 bp

>AT287354 NZ_LR134244:c972658-972624 [Staphylococcus warneri]
ACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Structures

Antitoxin