Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 313904..314098 Replicon chromosome
Accession NC_019770
Organism Enterococcus faecalis str. Symbioflor 1

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag EFS1_RS14610 Protein ID WP_015543884.1
Coordinates 314003..314098 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 313904..313968 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EFS1_RS01590 309516..311264 + 1749 WP_002389631.1 PTS transporter subunit EIIC -
EFS1_RS01595 311255..313288 + 2034 WP_002361171.1 transcription antiterminator -
EFS1_RS01600 313299..313733 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- 313904..313968 + 65 - - Antitoxin
EFS1_RS14610 314003..314098 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
EFS1_RS01610 314345..316117 + 1773 WP_002389635.1 PTS mannitol transporter subunit IICBA -
EFS1_RS01615 316132..316569 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
EFS1_RS01620 316584..317738 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
EFS1_RS01625 317805..318920 - 1116 WP_002389684.1 FAD-binding oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T28568 WP_015543884.1 NC_019770:c314098-314003 [Enterococcus faecalis str. Symbioflor 1]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T28568 NC_019770:c314098-314003 [Enterococcus faecalis str. Symbioflor 1]
ATGTACGAGATTGTCACAAAAATTCTTGTGCCGATTTTTGTCGGGATTGTCCTGAAACTTGTAACCATTTGGTTGGAAAA
ACAGAACGAGGAATAA

Antitoxin


Download         Length: 65 bp

>AT28568 NC_019770:313904-313968 [Enterococcus faecalis str. Symbioflor 1]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References