Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) bsrE-as-bsrE/-
Location 2087895..2088141 Replicon chromosome
Accession NZ_LN649259
Organism Bacillus subtilis strain BS49

Toxin (Protein)


Gene name bsrE Uniprot ID -
Locus tag VV34_RS23985 Protein ID WP_109789044.1
Coordinates 2087895..2087987 (+) Length 31 a.a.

Antitoxin (RNA)


Gene name as-bsrE
Locus tag -
Coordinates 2087968..2088141 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
VV34_RS10525 2083054..2083389 + 336 WP_009967409.1 hypothetical protein -
VV34_RS10530 2083436..2087041 - 3606 WP_004399367.1 membrane protein -
VV34_RS10535 2087274..2087606 - 333 WP_026009814.1 hypothetical protein -
VV34_RS23985 2087895..2087987 + 93 WP_109789044.1 type I toxin-antitoxin system toxin BsrE Toxin
- 2087968..2088141 - 174 - - Antitoxin
VV34_RS10540 2088256..2089098 - 843 WP_003231327.1 hypothetical protein -
VV34_RS10545 2089298..2089756 - 459 WP_003231326.1 type II toxin-antitoxin system antitoxin YobK -
VV34_RS10550 2089766..2091568 - 1803 WP_004399481.1 type II toxin-antitoxin system toxin ribonuclease YobL -
VV34_RS10555 2091670..2092227 - 558 WP_004399321.1 SMI1/KNR4 family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 2073880..2097558 23678


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(1-24)


Sequences

Toxin        


Download         Length: 31 a.a.        Molecular weight: 3358.16 Da        Isoelectric Point: 4.1840

>T285502 WP_109789044.1 NZ_LN649259:2087895-2087987 [Bacillus subtilis]
MSTFQALMLMLAIGSFIIALLTYIEKIDLP

Download         Length: 93 bp

Antitoxin


Download         Length: 174 bp

>AT285502 NZ_LN649259:c2088141-2087968 [Bacillus subtilis]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References