Detailed information of TA system TA285459

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): sprG-sprF/-
• Location: 1785818..1786048
• Replicon: chromosome
• Accession: NZ_LN554884
• Organism: Staphylococcus xylosus strain C2a

Toxin (Protein)

• Gene name: SprG2
• Uniprot ID: -
• Locus tag: SXYL_RS13295
• Protein ID: WP_080892139.1
• Coordinates: 1785941..1786048 (-)
• Length: 36 a.a.

Antitoxin (RNA)

Gene name	SprF1
Locus tag	-
Coordinates	1785818..1785949 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
SXYL_RS08460	1781164..1783047	-	1884	WP_047172518.1	glycosyltransferase	-
SXYL_RS08465	1783569..1783817	-	249	WP_029379025.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
SXYL_RS13490	1784804..1784956	-	153	WP_153227674.1	hypothetical protein	-
-	1785818..1785949	+	132	NuclAT_0	-	Antitoxin
-	1785818..1785949	+	132	NuclAT_0	-	Antitoxin
-	1785818..1785949	+	132	NuclAT_0	-	Antitoxin
-	1785818..1785949	+	132	NuclAT_0	-	Antitoxin
SXYL_RS13295	1785941..1786048	-	108	WP_080892139.1	putative holin-like toxin	Toxin
SXYL_RS08475	1786854..1787045	-	192	WP_047172519.1	hypothetical protein	-
SXYL_RS08480	1787391..1787801	-	411	WP_047172520.1	YolD-like family protein	-
SXYL_RS08485	1787948..1788310	-	363	WP_047173057.1	protein-export chaperone SecB	-
SXYL_RS08490	1788349..1788708	-	360	WP_047172521.1	hypothetical protein	-
SXYL_RS08495	1788715..1789287	-	573	WP_047172522.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	1781164..1830154	48990

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Small toxic protein BsrE-like (3-35)

Sequences

Toxin

Protein

• Length: 36 a.a.
• Molecular weight: 3772.76 Da
• Isoelectric Point: 10.4997

>T285459 WP_080892139.1 NZ_LN554884:c1786048-1785941 [Staphylococcus xylosus]
VVSIVEALHLMLGFGTFIVILLGLVIAIVKLSHKK

Nucleotide

• Length: 108 bp

Antitoxin

Nucleotide

• Length: 132 bp

>AT285459 NZ_LN554884:1785818-1785949 [Staphylococcus xylosus]
ATAGATAGAAAAAGGGCAATACACCATAAGTGTATCGCCCCAGTGAGCCCGTTAAAAAGACGGTGGCTAGTTACTAATAA
TTATCAAAAAATAATCATCGAAACCGGCCAAAGTTAGCGATGGTTATTTTTT

Structures

Antitoxin