Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2769699..2769958 Replicon chromosome
Accession NZ_CP128464
Organism Enterococcus faecalis strain RE25

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag QSV41_RS14045 Protein ID WP_002389461.1
Coordinates 2769699..2769842 (+) Length 48 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2769775..2769958 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QSV41_RS14025 2764814..2765029 - 216 WP_002354768.1 zinc ribbon domain-containing protein -
QSV41_RS14030 2765168..2766160 + 993 WP_002389493.1 biotin--[acetyl-CoA-carboxylase] ligase -
QSV41_RS14035 2766424..2767062 - 639 WP_002378863.1 lytic polysaccharide monooxygenase -
QSV41_RS14040 2767748..2769364 + 1617 WP_002389442.1 phosphatase PAP2/LCP family protein -
QSV41_RS14045 2769699..2769842 + 144 WP_002389461.1 type I toxin-antitoxin system toxin PepG1 Toxin
- 2769775..2769958 - 184 - - Antitoxin
QSV41_RS14050 2769966..2770100 + 135 WP_153829595.1 putative holin-like toxin -
QSV41_RS14055 2770331..2770474 + 144 WP_002381035.1 putative holin-like toxin -
QSV41_RS14060 2770669..2774496 - 3828 WP_010816211.1 WxL domain-containing protein -
QSV41_RS14065 2774483..2774845 - 363 WP_002378868.1 LPXTG cell wall anchor domain-containing protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-47)


Sequences


Toxin        


Download         Length: 48 a.a.        Molecular weight: 5450.67 Da        Isoelectric Point: 11.0942

>T284599 WP_002389461.1 NZ_CP128464:2769699-2769842 [Enterococcus faecalis]
MHVFPKFRERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 144 bp


Antitoxin


Download         Length: 184 bp

>AT284599 NZ_CP128464:c2769958-2769775 [Enterococcus faecalis]
TGCTACAATAGAGACGAAAAGAGAGGTATGCTCTAACATACCTCTCTAGTGTAGAGCCGTTTAAGACGGTGACCTTTTTA
GTTACAAAAATAACCGTACTCAGTCAAAGTAGACGGTTATTTTTTCTTGTCATTTTTAAGCAATTTCACAATCAGCGCAA
TCAAAGCAATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References