Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mqsRA (relBE)/MqsR-MqsA |
Location | 187795..188498 | Replicon | chromosome |
Accession | NZ_CP128416 | ||
Organism | Rhizobium sp. CSC1952 |
Toxin (Protein)
Gene name | mqsR | Uniprot ID | - |
Locus tag | QTA58_RS00925 | Protein ID | WP_289671350.1 |
Coordinates | 187795..188100 (+) | Length | 102 a.a. |
Antitoxin (Protein)
Gene name | mqsA | Uniprot ID | - |
Locus tag | QTA58_RS00930 | Protein ID | WP_289671351.1 |
Coordinates | 188097..188498 (+) | Length | 134 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
QTA58_RS00910 (QTA58_00910) | 183355..184605 | + | 1251 | WP_289671347.1 | GGDEF domain-containing protein | - |
QTA58_RS00915 (QTA58_00915) | 184705..186459 | + | 1755 | WP_289671348.1 | gamma-glutamyltransferase | - |
QTA58_RS00920 (QTA58_00920) | 186500..187759 | + | 1260 | WP_289671349.1 | cytochrome P450 | - |
QTA58_RS00925 (QTA58_00925) | 187795..188100 | + | 306 | WP_289671350.1 | type II toxin-antitoxin system MqsR family toxin | Toxin |
QTA58_RS00930 (QTA58_00930) | 188097..188498 | + | 402 | WP_289671351.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin |
QTA58_RS00935 (QTA58_00935) | 188570..189379 | - | 810 | WP_289671353.1 | SDR family oxidoreductase | - |
QTA58_RS00940 (QTA58_00940) | 189534..190010 | + | 477 | WP_289671354.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
QTA58_RS00945 (QTA58_00945) | 190015..190359 | - | 345 | WP_085423011.1 | cupin domain-containing protein | - |
QTA58_RS00950 (QTA58_00950) | 190390..191673 | - | 1284 | WP_289671355.1 | O-acetylhomoserine aminocarboxypropyltransferase | - |
QTA58_RS00955 (QTA58_00955) | 191897..192325 | - | 429 | WP_289671357.1 | CoA-binding protein | - |
QTA58_RS00960 (QTA58_00960) | 192413..192763 | + | 351 | WP_289671359.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 102 a.a. Molecular weight: 11610.49 Da Isoelectric Point: 9.3211
>T284551 WP_289671350.1 NZ_CP128416:187795-188100 [Rhizobium sp. CSC1952]
MNEKRKAHCPLERVKSLVKAGQVRTTYSALAGASRLDFTLSEMYETVLALTLTDFYKSMTTYADHKVWQDVYRPMTKAGR
IYLKLTVVDDVLIVSFKELNE
MNEKRKAHCPLERVKSLVKAGQVRTTYSALAGASRLDFTLSEMYETVLALTLTDFYKSMTTYADHKVWQDVYRPMTKAGR
IYLKLTVVDDVLIVSFKELNE
Download Length: 306 bp
Antitoxin
Download Length: 134 a.a. Molecular weight: 14371.51 Da Isoelectric Point: 7.6332
>AT284551 WP_289671351.1 NZ_CP128416:188097-188498 [Rhizobium sp. CSC1952]
MKCPACGEAELSRQTRDLPYSYKGEETTIASVTGDFCAACGEIVLGDAEARRINAAMLEFNKQVNAGSVDPAFVASVRKK
LKLDQKEAGDIFGGGVNAFSRYENGKTKPPVALVKLLKLLDKHPELLQEIRAA
MKCPACGEAELSRQTRDLPYSYKGEETTIASVTGDFCAACGEIVLGDAEARRINAAMLEFNKQVNAGSVDPAFVASVRKK
LKLDQKEAGDIFGGGVNAFSRYENGKTKPPVALVKLLKLLDKHPELLQEIRAA
Download Length: 402 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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