Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 4240795..4241494 Replicon chromosome
Accession NZ_CP127871
Organism Pseudomonas kurunegalensis strain ANKC.G2

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag QQ992_RS19400 Protein ID WP_119369313.1
Coordinates 4241198..4241494 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag QQ992_RS19395 Protein ID WP_119369314.1
Coordinates 4240795..4241196 (-) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QQ992_RS19375 (QQ992_19375) 4235932..4236753 - 822 WP_286110733.1 transporter substrate-binding domain-containing protein -
QQ992_RS19380 (QQ992_19380) 4236829..4237758 - 930 WP_264360164.1 FAD-binding protein -
QQ992_RS19385 (QQ992_19385) 4237759..4238508 - 750 WP_016498683.1 electron transfer flavoprotein subunit beta/FixA family protein -
QQ992_RS19390 (QQ992_19390) 4239041..4240723 + 1683 WP_110740658.1 electron transfer flavoprotein-ubiquinone oxidoreductase -
QQ992_RS19395 (QQ992_19395) 4240795..4241196 - 402 WP_119369314.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
QQ992_RS19400 (QQ992_19400) 4241198..4241494 - 297 WP_119369313.1 type II toxin-antitoxin system MqsR family toxin Toxin
QQ992_RS19405 (QQ992_19405) 4241589..4242914 - 1326 WP_286110734.1 MFS transporter -
QQ992_RS19410 (QQ992_19410) 4242987..4243466 - 480 WP_286110735.1 histidine kinase -
QQ992_RS19415 (QQ992_19415) 4243766..4244227 + 462 WP_119369310.1 azurin -
QQ992_RS19420 (QQ992_19420) 4244266..4244766 - 501 WP_286110736.1 sigma-70 family RNA polymerase sigma factor -
QQ992_RS19425 (QQ992_19425) 4244997..4246178 + 1182 WP_286110737.1 efflux RND transporter periplasmic adaptor subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Antitoxin MqsA/HigA-2

(1-131)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11038.01 Da        Isoelectric Point: 10.1794

>T284313 WP_119369313.1 NZ_CP127871:c4241494-4241198 [Pseudomonas kurunegalensis]
MEKRTPHCPLERVKALLSLGKVRTTGVAAQGARALGIEPFAMLNIVRELTAADFHKSMTAYNNHRVWQDVYRPQTAVGKV
YLKLMVVDDLLIVSFKEL

Download         Length: 297 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14675.93 Da        Isoelectric Point: 5.2621

>AT284313 WP_119369314.1 NZ_CP127871:c4241196-4240795 [Pseudomonas kurunegalensis]
MKCPLCGGAELVAQSKDMPYRYKGEATVIPDVFGDYCPACGEVVLRMGEAQRMSDLMSAFERQVNGAVVDPAFIAAMRRK
FDLDQREAGEIFGGGVNAFSRYENGKTTPPVALVKLLKLLDRHPELFEEVRTA

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References