Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/Txe-RelB
Location 1708796..1709301 Replicon chromosome
Accession NZ_CP126964
Organism Pseudoglutamicibacter albus strain UMB0715

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag CJ193_RS07760 Protein ID WP_101630574.1
Coordinates 1709035..1709301 (+) Length 89 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag CJ193_RS07755 Protein ID WP_101630575.1
Coordinates 1708796..1709038 (+) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CJ193_RS07740 (CJ193_007740) 1705931..1706911 - 981 WP_143483924.1 DUF1963 domain-containing protein -
CJ193_RS07745 (CJ193_007745) 1706992..1707474 + 483 WP_143483923.1 hypothetical protein -
CJ193_RS07750 (CJ193_007750) 1707554..1708585 + 1032 WP_101630576.1 LLM class flavin-dependent oxidoreductase -
CJ193_RS07755 (CJ193_007755) 1708796..1709038 + 243 WP_101630575.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
CJ193_RS07760 (CJ193_007760) 1709035..1709301 + 267 WP_101630574.1 Txe/YoeB family addiction module toxin Toxin
CJ193_RS07765 (CJ193_007765) 1709552..1711471 + 1920 WP_101630625.1 cation-translocating P-type ATPase -
CJ193_RS07770 (CJ193_007770) 1711522..1712304 + 783 WP_101630573.1 hypothetical protein -
CJ193_RS07775 (CJ193_007775) 1712340..1713200 - 861 WP_101630572.1 DUF108 domain-containing protein -
CJ193_RS07780 (CJ193_007780) 1713367..1713735 + 369 WP_101630571.1 DUF488 family protein -
CJ193_RS07785 (CJ193_007785) 1713773..1714174 + 402 WP_101630570.1 GNAT family N-acetyltransferase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(6-86)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-67)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10213.86 Da        Isoelectric Point: 10.0635

>T283409 WP_101630574.1 NZ_CP126964:1709035-1709301 [Pseudoglutamicibacter albus]
VTNWRLVYSKQAQKDAKKLASSGLKSKARMLLDLLSEDPITSPLRFEKLVGDLAGCYSRRINIQHRLVYEVDAEARVVHV
LRMWTHYE

Download         Length: 267 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 8722.63 Da        Isoelectric Point: 3.8345

>AT283409 WP_101630575.1 NZ_CP126964:1708796-1709038 [Pseudoglutamicibacter albus]
MTAVNATSARNNLYRLIDQVNDESEPVTITGQRGNAVLVGEEDWRAIQETLFLASIPGMTESILAARAEGIESGSEELDW

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References