Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
| Location | 2488316..2488815 | Replicon | chromosome |
| Accession | NZ_CP126627 | ||
| Organism | Staphylococcus aureus strain 17-21 | ||
Toxin (Protein)
| Gene name | yoeB | Uniprot ID | - |
| Locus tag | QPR40_RS12380 | Protein ID | WP_000074044.1 |
| Coordinates | 2488316..2488558 (-) | Length | 81 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | T1YBB2 |
| Locus tag | QPR40_RS12385 | Protein ID | WP_000587618.1 |
| Coordinates | 2488558..2488815 (-) | Length | 86 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QPR40_RS12360 (QPR40_12360) | 2483621..2484808 | - | 1188 | WP_000026189.1 | MFS transporter | - |
| QPR40_RS12365 (QPR40_12365) | 2485204..2485980 | - | 777 | WP_000072147.1 | iron export ABC transporter permease subunit FetB | - |
| QPR40_RS12370 (QPR40_12370) | 2485973..2486635 | - | 663 | WP_000923523.1 | ATP-binding cassette domain-containing protein | - |
| QPR40_RS12375 (QPR40_12375) | 2486883..2487959 | - | 1077 | WP_001076672.1 | M42 family metallopeptidase | - |
| QPR40_RS12380 (QPR40_12380) | 2488316..2488558 | - | 243 | WP_000074044.1 | Txe/YoeB family addiction module toxin | Toxin |
| QPR40_RS12385 (QPR40_12385) | 2488558..2488815 | - | 258 | WP_000587618.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| QPR40_RS12390 (QPR40_12390) | 2489174..2489629 | + | 456 | WP_000732082.1 | DUF1307 domain-containing protein | - |
| QPR40_RS12395 (QPR40_12395) | 2489797..2491373 | - | 1577 | Protein_2396 | FMN-binding glutamate synthase family protein | - |
| QPR40_RS12400 (QPR40_12400) | 2491567..2492313 | + | 747 | WP_285144378.1 | CPBP family lipoprotein N-acylation protein LnsB | - |
| QPR40_RS12405 (QPR40_12405) | 2492551..2493744 | - | 1194 | WP_000675411.1 | MFS transporter | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|