Detailed information of TA system TA282620

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): yonT-SR6/-
• Location: 2252536..2252865
• Replicon: chromosome
• Accession: NZ_CP126100
• Organism: Bacillus halotolerans strain LN2

Toxin (Protein)

• Gene name: yonT
• Uniprot ID: -
• Locus tag: QNH41_RS11435
• Protein ID: WP_080010576.1
• Coordinates: 2252536..2252787 (-)
• Length: 84 a.a.

Antitoxin (RNA)

Gene name	SR6
Locus tag	-
Coordinates	2252765..2252865 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
QNH41_RS11420	2248784..2250652	-	1869	WP_283912367.1	hypothetical protein	-
QNH41_RS11425	2250989..2252221	-	1233	WP_283912368.1	hypothetical protein	-
QNH41_RS11430	2252303..2252491	-	189	WP_004399547.1	hypothetical protein	-
QNH41_RS11435	2252536..2252787	-	252	WP_080010576.1	hypothetical protein	Toxin
-	2252765..2252865	+	101	-	-	Antitoxin
QNH41_RS11440	2252806..2252982	-	177	WP_017696861.1	hypothetical protein	-
-	2252923..2253020	+	98	NuclAT_0	-	-
-	2252923..2253020	+	98	NuclAT_0	-	-
-	2252923..2253020	+	98	NuclAT_0	-	-
-	2252923..2253020	+	98	NuclAT_0	-	-
QNH41_RS11445	2253947..2254141	+	195	WP_283912369.1	hypothetical protein	-
QNH41_RS11450	2254181..2256709	+	2529	WP_283912370.1	hypothetical protein	-
QNH41_RS11455	2256962..2257240	+	279	WP_213384713.1	HU family DNA-binding protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	2182701..2348943	166242

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 84 a.a.
• Molecular weight: 10071.13 Da
• Isoelectric Point: 10.0301

>T282620 WP_080010576.1 NZ_CP126100:c2252787-2252536 [Bacillus halotolerans]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEAQTLINIIFIVTCIIAILLWIIYFVFLKLRN
KSH

Nucleotide

• Length: 252 bp

Antitoxin

Nucleotide

• Length: 101 bp

>AT282620 NZ_CP126100:2252765-2252865 [Bacillus halotolerans]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Structures

Antitoxin