Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-YefM
Location 4007031..4007546 Replicon chromosome
Accession NZ_CP125996
Organism Gordonia sp. L191

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag QNM97_RS18085 Protein ID WP_020172205.1
Coordinates 4007031..4007285 (-) Length 85 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag QNM97_RS18090 Protein ID WP_283819682.1
Coordinates 4007286..4007546 (-) Length 87 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QNM97_RS18065 (QNM97_18065) 4002412..4002642 - 231 WP_283819678.1 hypothetical protein -
QNM97_RS18070 (QNM97_18070) 4002895..4003965 + 1071 WP_283819679.1 phospholipase D-like domain-containing protein -
QNM97_RS18075 (QNM97_18075) 4003993..4005315 - 1323 WP_283819680.1 alpha/beta hydrolase-fold protein -
QNM97_RS18080 (QNM97_18080) 4005425..4006909 - 1485 WP_283819681.1 arylsulfotransferase family protein -
QNM97_RS18085 (QNM97_18085) 4007031..4007285 - 255 WP_020172205.1 Txe/YoeB family addiction module toxin Toxin
QNM97_RS18090 (QNM97_18090) 4007286..4007546 - 261 WP_283819682.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
QNM97_RS18095 (QNM97_18095) 4007831..4008169 + 339 WP_283819683.1 hypothetical protein -
QNM97_RS18100 (QNM97_18100) 4008166..4010454 + 2289 WP_283819684.1 hypothetical protein -
QNM97_RS18105 (QNM97_18105) 4010537..4011196 + 660 WP_283819685.1 hypothetical protein -
QNM97_RS18110 (QNM97_18110) 4011347..4012414 + 1068 WP_283819686.1 PrsW family glutamic-type intramembrane protease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(2-69)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 9925.31 Da        Isoelectric Point: 7.2745

>T282519 WP_020172205.1 NZ_CP125996:c4007285-4007031 [Gordonia sp. L191]
VRLVWDQSAWEDYVHWQTADRRLLKRINTLLDACLRDAFTGIGKPEPLKYGVPGAWSRRISDEHRLVYLVDGDDLIILQA
RYHY

Download         Length: 255 bp

Antitoxin


Download         Length: 87 a.a.        Molecular weight: 9603.68 Da        Isoelectric Point: 4.5859

>AT282519 WP_283819682.1 NZ_CP125996:c4007546-4007286 [Gordonia sp. L191]
MSISASEARKLLFPLIEQVNDDRSAIEIVSRKGNAVLMSADEYAAWQETAYLFRSPANARRLLESYTRVSVGQTEVHDLD
RTDGDG

Download         Length: 261 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References