Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2730121..2730383 Replicon chromosome
Accession NZ_CP124916
Organism Enterococcus faecalis strain EfsC17

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag QLQ62_RS13540 Protein ID WP_002367458.1
Coordinates 2730240..2730383 (-) Length 48 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2730121..2730307 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QLQ62_RS13525 2725578..2728322 + 2745 WP_002411259.1 glycosyl hydrolase family 65 protein -
QLQ62_RS13530 2728337..2728987 + 651 WP_002389419.1 beta-phosphoglucomutase -
QLQ62_RS13535 2729407..2730000 + 594 WP_002389391.1 PBECR4 domain-containing protein -
- 2730121..2730307 + 187 - - Antitoxin
QLQ62_RS13540 2730240..2730383 - 144 WP_002367458.1 type I toxin-antitoxin system toxin PepG1 Toxin
QLQ62_RS13545 2730615..2731586 - 972 WP_002381060.1 ribose-phosphate diphosphokinase -
QLQ62_RS13550 2731761..2732198 - 438 WP_002389480.1 peptide-methionine (R)-S-oxide reductase MsrB -
QLQ62_RS13555 2732331..2732885 - 555 WP_002354869.1 Maf family protein -
QLQ62_RS13560 2732910..2735042 - 2133 WP_002389406.1 DNA mismatch repair endonuclease MutL -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-47)


Sequences


Toxin        


Download         Length: 48 a.a.        Molecular weight: 5311.50 Da        Isoelectric Point: 10.8331

>T281757 WP_002367458.1 NZ_CP124916:c2730383-2730240 [Enterococcus faecalis]
MSVLPKFTERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 144 bp


Antitoxin


Download         Length: 187 bp

>AT281757 NZ_CP124916:2730121-2730307 [Enterococcus faecalis]
TGTGCTAGAATGTAGATGAAAAGAGAGATATGCGTCAACATACCTCTCTAGTGTAGAGCCGTTTGAGACGGTGACCGATT
GTATTATTTAAAAATAACCGTACTGGTCAAAGTAGATGGTTATTTTTTCTTGTCATTTTTAAGCAATTTCACAATCAGTG
CAATCAAAGCAATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References