Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-YefM
Location 1744956..1745458 Replicon chromosome
Accession NZ_CP123967
Organism Tessaracoccus sp. T21

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag QH948_RS08095 Protein ID WP_281143946.1
Coordinates 1745213..1745458 (+) Length 82 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag QH948_RS08090 Protein ID WP_281143945.1
Coordinates 1744956..1745210 (+) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QH948_RS08070 (QH948_08070) 1741055..1742035 - 981 WP_281143941.1 NERD domain-containing protein -
QH948_RS08075 (QH948_08075) 1742252..1742833 + 582 WP_281143942.1 TetR-like C-terminal domain-containing protein -
QH948_RS08080 (QH948_08080) 1742830..1743963 + 1134 WP_281143943.1 SGNH/GDSL hydrolase family protein -
QH948_RS08085 (QH948_08085) 1744055..1744861 + 807 WP_281143944.1 hypothetical protein -
QH948_RS08090 (QH948_08090) 1744956..1745210 + 255 WP_281143945.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
QH948_RS08095 (QH948_08095) 1745213..1745458 + 246 WP_281143946.1 Txe/YoeB family addiction module toxin Toxin
QH948_RS08110 (QH948_08110) 1748158..1748427 - 270 WP_281143948.1 Dyp-type peroxidase -
QH948_RS08115 (QH948_08115) 1748567..1749873 + 1307 Protein_1585 ISL3 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- flank IS/Tn - - 1749613..1749873 260


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(1-81)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-72)


Sequences

Toxin        


Download         Length: 82 a.a.        Molecular weight: 9617.90 Da        Isoelectric Point: 8.0666

>T279291 WP_281143946.1 NZ_CP123967:1745213-1745458 [Tessaracoccus sp. T21]
MLLVWDQNASEDYLWWQTQDRRVLKRISTLIQDVSRNGNEGLGKPEALRHDFAGYWSRRITEEHRLVHKIVGDEIRIAAC
R

Download         Length: 246 bp

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9450.55 Da        Isoelectric Point: 4.4335

>AT279291 WP_281143945.1 NZ_CP123967:1744956-1745210 [Tessaracoccus sp. T21]
MKTMSYTESRARYAEVLDSVVDDREEVVITRAGHDPVVIVSLDEYEALKETAYLLRSPANARRLLDAMERLEGGRGDPHD
LTAD

Download         Length: 255 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References