Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 710256..710949 Replicon chromosome
Accession NZ_CP123255
Organism Escherichia coli strain YZMc17-1

Toxin (Protein)


Gene name mqsR Uniprot ID S1EZG2
Locus tag N4680_RS03465 Protein ID WP_000415584.1
Coordinates 710256..710552 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID S1EBV2
Locus tag N4680_RS03470 Protein ID WP_000650107.1
Coordinates 710554..710949 (+) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N4680_RS03430 (705344) 705344..705658 - 315 WP_000958598.1 putative quinol monooxygenase -
N4680_RS03435 (705689) 705689..706270 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
N4680_RS03440 (706589) 706589..706921 + 333 WP_224684392.1 DUF2645 family protein -
N4680_RS03445 (706967) 706967..708316 - 1350 WP_000673402.1 quorum sensing histidine kinase QseC -
N4680_RS03450 (708313) 708313..708972 - 660 WP_001221493.1 quorum sensing response regulator transcription factor QseB -
N4680_RS03455 (709124) 709124..709516 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
N4680_RS03460 (709569) 709569..710051 + 483 WP_000183505.1 GyrI-like domain-containing protein -
N4680_RS03465 (710256) 710256..710552 + 297 WP_000415584.1 type II toxin-antitoxin system toxin MqsR Toxin
N4680_RS03470 (710554) 710554..710949 + 396 WP_000650107.1 type II toxin-antitoxin system antitoxin MqsA Antitoxin
N4680_RS03475 (711082) 711082..712689 + 1608 WP_001295629.1 ABC transporter substrate-binding protein -
N4680_RS03480 (712827) 712827..715085 + 2259 WP_001281841.1 DNA topoisomerase IV subunit A -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Zinc finger, MqsA-type

(3-47)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11231.96 Da        Isoelectric Point: 8.9070

>T278796 WP_000415584.1 NZ_CP123255:710256-710552 [Escherichia coli]
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Download         Length: 297 bp

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14703.10 Da        Isoelectric Point: 9.2136

>AT278796 WP_000650107.1 NZ_CP123255:710554-710949 [Escherichia coli]
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR

Download         Length: 396 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 3HI2

Antitoxin

Source ID Structure
PDB 3HI2
PDB 3GA8
PDB 3O9X
PDB 2KZ8
PDB 3FMY
PDB 3GN5
AlphaFold DB A0A7U9LU65

References