Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 713603..714296 Replicon chromosome
Accession NZ_CP123237
Organism Escherichia coli strain 4588

Toxin (Protein)


Gene name mqsR Uniprot ID S1EZG2
Locus tag QET42_RS03490 Protein ID WP_000415584.1
Coordinates 713603..713899 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID S1EBV2
Locus tag QET42_RS03495 Protein ID WP_000650107.1
Coordinates 713901..714296 (+) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QET42_RS03455 (708691) 708691..709005 - 315 WP_000958598.1 putative quinol monooxygenase -
QET42_RS03460 (709036) 709036..709617 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
QET42_RS03465 (709936) 709936..710268 + 333 WP_000917684.1 DUF2645 family protein -
QET42_RS03470 (710314) 710314..711663 - 1350 WP_001618857.1 quorum sensing histidine kinase QseC -
QET42_RS03475 (711660) 711660..712319 - 660 WP_001221493.1 quorum sensing response regulator transcription factor QseB -
QET42_RS03480 (712471) 712471..712863 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
QET42_RS03485 (712916) 712916..713398 + 483 WP_000183505.1 GyrI-like domain-containing protein -
QET42_RS03490 (713603) 713603..713899 + 297 WP_000415584.1 type II toxin-antitoxin system toxin MqsR Toxin
QET42_RS03495 (713901) 713901..714296 + 396 WP_000650107.1 type II toxin-antitoxin system antitoxin MqsA Antitoxin
QET42_RS03500 (714429) 714429..716036 + 1608 WP_001295629.1 ABC transporter substrate-binding protein -
QET42_RS03505 (716174) 716174..718432 + 2259 WP_049253102.1 DNA topoisomerase IV subunit A -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Zinc finger, MqsA-type

(3-47)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11231.96 Da        Isoelectric Point: 8.9070

>T278703 WP_000415584.1 NZ_CP123237:713603-713899 [Escherichia coli]
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Download         Length: 297 bp

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14703.10 Da        Isoelectric Point: 9.2136

>AT278703 WP_000650107.1 NZ_CP123237:713901-714296 [Escherichia coli]
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR

Download         Length: 396 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 3HI2

Antitoxin

Source ID Structure
PDB 3HI2
PDB 3GA8
PDB 3O9X
PDB 2KZ8
PDB 3FMY
PDB 3GN5
AlphaFold DB A0A7U9LU65

References