Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 363133..363670 Replicon chromosome
Accession NZ_CP122407
Organism Rugamonas sp. DEMB1

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag QC826_RS01645 Protein ID WP_279764123.1
Coordinates 363133..363429 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag QC826_RS01650 Protein ID WP_279764124.1
Coordinates 363431..363670 (+) Length 80 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QC826_RS01630 (QC826_01630) 359077..360681 + 1605 WP_279764120.1 lipase family protein -
QC826_RS01635 (QC826_01635) 360875..362251 + 1377 WP_279764121.1 SGNH/GDSL hydrolase family protein -
QC826_RS01640 (QC826_01640) 362317..362997 + 681 WP_279764122.1 OmpW family outer membrane protein -
QC826_RS01645 (QC826_01645) 363133..363429 + 297 WP_279764123.1 type II toxin-antitoxin system MqsR family toxin Toxin
QC826_RS01650 (QC826_01650) 363431..363670 + 240 WP_279764124.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
QC826_RS01655 (QC826_01655) 363749..364933 - 1185 WP_279764125.1 acyl-CoA dehydrogenase -
QC826_RS01660 (QC826_01660) 365078..365581 - 504 WP_093382053.1 flavin reductase family protein -
QC826_RS01665 (QC826_01665) 365789..366664 + 876 WP_279764126.1 alpha/beta hydrolase -
QC826_RS01670 (QC826_01670) 366780..367139 - 360 WP_279764127.1 hypothetical protein -
QC826_RS01675 (QC826_01675) 367425..367991 + 567 WP_093382058.1 peptide-methionine (S)-S-oxide reductase MsrA -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(6-97)

Antitoxin

Zinc finger, MqsA-type

(3-47)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 10795.65 Da        Isoelectric Point: 10.0270

>T276839 WP_279764123.1 NZ_CP122407:363133-363429 [Rugamonas sp. DEMB1]
MEKISPHYSLPKVKALIDEGRVASTFSALTGAAALGIDFAGMVAIVKALTRRDFYKSMTSRADHHIWQDVYRPSTPVGKV
YLKLTVVDGVLIVSFKEL

Download         Length: 297 bp

Antitoxin


Download         Length: 80 a.a.        Molecular weight: 8334.55 Da        Isoelectric Point: 6.1931

>AT276839 WP_279764124.1 NZ_CP122407:363431-363670 [Rugamonas sp. DEMB1]
MKCPVCAAAELVRDCRDLPHAYKGASTMIAAVCGDYCPACGESVLDAKESSRVSAAMLAFHRQVEAANREADHIVGTPP

Download         Length: 240 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References