Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-RelB
Location 2318110..2318623 Replicon chromosome
Accession NZ_CP122379
Organism Aequorivita sp. Ant34-E75

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag QCQ61_RS10445 Protein ID WP_279447595.1
Coordinates 2318110..2318367 (-) Length 86 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag QCQ61_RS10450 Protein ID WP_279447596.1
Coordinates 2318369..2318623 (-) Length 85 a.a.

Genomic Context


QCQ61_RS10420QCQ61_RS10425QCQ61_RS10430QCQ61_RS10435QCQ61_RS10440QCQ61_RS10460QCQ61_RS10465QCQ61_RS10470QCQ61_RS10445QCQ61_RS10450QCQ61_RS10455
Location: 2313120..2314469 (1350 bp)
Type: Others
Protein ID: WP_279447590.1
Location: 2314612..2315436 (825 bp)
Type: Others
Protein ID: WP_279447591.1
Location: 2315446..2317215 (1770 bp)
Type: Others
Protein ID: WP_279447592.1
Location: 2317217..2317801 (585 bp)
Type: Others
Protein ID: WP_279447593.1
Location: 2317805..2318038 (234 bp)
Type: Others
Protein ID: WP_279447594.1
Location: 2320979..2321377 (399 bp)
Type: Others
Protein ID: WP_279447598.1
Location: 2321367..2322692 (1326 bp)
Type: Others
Protein ID: WP_279447599.1
Location: 2322692..2323618 (927 bp)
Type: Others
Protein ID: WP_279447600.1
Location: 2318110..2318367 (258 bp)
Type: Toxin
Protein ID: WP_279447595.1
Location: 2318369..2318623 (255 bp)
Type: Antitoxin
Protein ID: WP_279447596.1
Location: 2318734..2320791 (2058 bp)
Type: Others
Protein ID: WP_279447597.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
QCQ61_RS10420 (QCQ61_10420)2313120..2314469+1350WP_279447590.1cbb3-type cytochrome c oxidase subunit I-
QCQ61_RS10425 (QCQ61_10425)2314612..2315436+825WP_279447591.1CbbQ/NirQ/NorQ/GpvN family protein-
QCQ61_RS10430 (QCQ61_10430)2315446..2317215+1770WP_279447592.1VWA domain-containing protein-
QCQ61_RS10435 (QCQ61_10435)2317217..2317801+585WP_279447593.1cytochrome c oxidase subunit 3-
QCQ61_RS10440 (QCQ61_10440)2317805..2318038+234WP_279447594.1cytochrome C oxidase subunit IV family protein-
QCQ61_RS10445 (QCQ61_10445)2318110..2318367-258WP_279447595.1Txe/YoeB family addiction module toxinToxin
QCQ61_RS10450 (QCQ61_10450)2318369..2318623-255WP_279447596.1type II toxin-antitoxin system Phd/YefM family antitoxinAntitoxin
QCQ61_RS10455 (QCQ61_10455)2318734..2320791-2058WP_279447597.1acetate--CoA ligase family protein-
QCQ61_RS10460 (QCQ61_10460)2320979..2321377+399WP_279447598.1cytochrome c-
QCQ61_RS10465 (QCQ61_10465)2321367..2322692+1326WP_279447599.1cbb3-type cytochrome c oxidase subunit I-
QCQ61_RS10470 (QCQ61_10470)2322692..2323618+927WP_279447600.1quinolinate synthase NadA-

Associated MGEs


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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(5-84)

Antitoxin

(1-73)


Sequences


Toxin        


Download         Length: 86 a.a.        Molecular weight: 10470.15 Da        Isoelectric Point: 9.7596

>T276810 WP_279447595.1 NZ_CP122379:c2318367-2318110 [Aequorivita sp. Ant34-E75]
MKYIFVDESWEDYLYWQKTDKKKLKKINEILKDIARNPFDGIGKPEPLKHKYAGFWSRRIDSEHRLIYKFKEGEILIAKC
RFHYD

Download         Length: 258 bp


Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9648.95 Da        Isoelectric Point: 7.0122

>AT276810 WP_279447596.1 NZ_CP122379:c2318623-2318369 [Aequorivita sp. Ant34-E75]
MQITTVSDFRKDIKTYLDRVVKNVETLIINRGKDSGIVIMSLQEYNSLMATNHELSSRKNERRLDSAIDKLNSGSTFNKE
LIED

Download         Length: 255 bp


Similar Proteins


Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures


Toxin

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Source
ID
Structure
No matching records found


Antitoxin

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Source
ID
Structure
No matching records found

References