Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-RelB
Location 2318110..2318623 Replicon chromosome
Accession NZ_CP122379
Organism Aequorivita sp. Ant34-E75

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag QCQ61_RS10445 Protein ID WP_279447595.1
Coordinates 2318110..2318367 (-) Length 86 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag QCQ61_RS10450 Protein ID WP_279447596.1
Coordinates 2318369..2318623 (-) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QCQ61_RS10420 (QCQ61_10420) 2313120..2314469 + 1350 WP_279447590.1 cbb3-type cytochrome c oxidase subunit I -
QCQ61_RS10425 (QCQ61_10425) 2314612..2315436 + 825 WP_279447591.1 CbbQ/NirQ/NorQ/GpvN family protein -
QCQ61_RS10430 (QCQ61_10430) 2315446..2317215 + 1770 WP_279447592.1 VWA domain-containing protein -
QCQ61_RS10435 (QCQ61_10435) 2317217..2317801 + 585 WP_279447593.1 cytochrome c oxidase subunit 3 -
QCQ61_RS10440 (QCQ61_10440) 2317805..2318038 + 234 WP_279447594.1 cytochrome C oxidase subunit IV family protein -
QCQ61_RS10445 (QCQ61_10445) 2318110..2318367 - 258 WP_279447595.1 Txe/YoeB family addiction module toxin Toxin
QCQ61_RS10450 (QCQ61_10450) 2318369..2318623 - 255 WP_279447596.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
QCQ61_RS10455 (QCQ61_10455) 2318734..2320791 - 2058 WP_279447597.1 acetate--CoA ligase family protein -
QCQ61_RS10460 (QCQ61_10460) 2320979..2321377 + 399 WP_279447598.1 cytochrome c -
QCQ61_RS10465 (QCQ61_10465) 2321367..2322692 + 1326 WP_279447599.1 cbb3-type cytochrome c oxidase subunit I -
QCQ61_RS10470 (QCQ61_10470) 2322692..2323618 + 927 WP_279447600.1 quinolinate synthase NadA -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-73)


Sequences

Toxin        


Download         Length: 86 a.a.        Molecular weight: 10470.15 Da        Isoelectric Point: 9.7596

>T276810 WP_279447595.1 NZ_CP122379:c2318367-2318110 [Aequorivita sp. Ant34-E75]
MKYIFVDESWEDYLYWQKTDKKKLKKINEILKDIARNPFDGIGKPEPLKHKYAGFWSRRIDSEHRLIYKFKEGEILIAKC
RFHYD

Download         Length: 258 bp

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9648.95 Da        Isoelectric Point: 7.0122

>AT276810 WP_279447596.1 NZ_CP122379:c2318623-2318369 [Aequorivita sp. Ant34-E75]
MQITTVSDFRKDIKTYLDRVVKNVETLIINRGKDSGIVIMSLQEYNSLMATNHELSSRKNERRLDSAIDKLNSGSTFNKE
LIED

Download         Length: 255 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References