Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2134871..2135085 Replicon chromosome
Accession NZ_CP121861
Organism Bacillus stercoris strain Mal05

Toxin (Protein)


Gene name yonT Uniprot ID -
Locus tag QA442_RS11310 Protein ID WP_071579314.1
Coordinates 2134909..2135085 (+) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2134871..2134968 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QA442_RS11295 (2129873) 2129873..2130151 - 279 WP_279474460.1 HU-related DNA-binding protein HupN -
QA442_RS11300 (2130396) 2130396..2132915 - 2520 WP_279474461.1 DNA-directed RNA polymerase YonO -
QA442_RS11305 (2132960) 2132960..2133139 - 180 WP_064814709.1 hypothetical protein -
- (2134871) 2134871..2134968 - 98 NuclAT_0 - Antitoxin
- (2134871) 2134871..2134968 - 98 NuclAT_0 - Antitoxin
- (2134871) 2134871..2134968 - 98 NuclAT_0 - Antitoxin
- (2134871) 2134871..2134968 - 98 NuclAT_0 - Antitoxin
QA442_RS11310 (2134909) 2134909..2135085 + 177 WP_071579314.1 hypothetical protein Toxin
QA442_RS11315 (2135104) 2135104..2135355 + 252 WP_279474464.1 hypothetical protein -
QA442_RS11320 (2135400) 2135400..2135558 + 159 WP_243572767.1 hypothetical protein -
QA442_RS11325 (2135646) 2135646..2136863 + 1218 WP_279474466.1 hypothetical protein -
QA442_RS11330 (2137191) 2137191..2139059 + 1869 WP_279474467.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 2071712..2209201 137489


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6878.49 Da        Isoelectric Point: 12.8849

>T276590 WP_071579314.1 NZ_CP121861:2134909-2135085 [Bacillus stercoris]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRKRIRR

Download         Length: 177 bp

Antitoxin


Download         Length: 98 bp

>AT276590 NZ_CP121861:c2134968-2134871 [Bacillus stercoris]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References