Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 1877972..1878672 Replicon chromosome
Accession NZ_CP120359
Organism Pseudomonas sp. AA-38

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag PVE35_RS08615 Protein ID WP_277374389.1
Coordinates 1877972..1878268 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag PVE35_RS08620 Protein ID WP_277374390.1
Coordinates 1878271..1878672 (+) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PVE35_RS08580 1873680..1874378 + 699 WP_268184335.1 ScpA family protein -
PVE35_RS08585 1874375..1875169 + 795 WP_268178053.1 SMC-Scp complex subunit ScpB -
PVE35_RS08590 1875263..1875445 + 183 WP_268178052.1 DUF1289 domain-containing protein -
PVE35_RS08595 1875603..1876328 + 726 WP_268178051.1 amidotransferase -
PVE35_RS08600 1876408..1877097 - 690 WP_277374388.1 crotonase/enoyl-CoA hydratase family protein -
PVE35_RS08605 1877281..1877490 + 210 WP_268178049.1 hypothetical protein -
PVE35_RS08615 1877972..1878268 + 297 WP_277374389.1 type II toxin-antitoxin system MqsR family toxin Toxin
PVE35_RS08620 1878271..1878672 + 402 WP_277374390.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
PVE35_RS08625 1878997..1879353 + 357 WP_277374391.1 hypothetical protein -
PVE35_RS08630 1879614..1879823 + 210 WP_277374392.1 hypothetical protein -
PVE35_RS08635 1879926..1881053 + 1128 WP_277374393.1 elongation factor P maturation arginine rhamnosyltransferase EarP -
PVE35_RS08640 1881097..1881669 + 573 WP_268178026.1 elongation factor P -
PVE35_RS08645 1881743..1882243 + 501 WP_277374394.1 RDD family protein -
PVE35_RS08650 1882254..1883204 - 951 WP_277374395.1 LysR family transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(2-97)

Antitoxin

Antitoxin MqsA/HigA-2

(1-131)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11314.12 Da        Isoelectric Point: 8.4498

>T274891 WP_277374389.1 NZ_CP120359:1877972-1878268 [Pseudomonas sp. AA-38]
MEKRKPHFKLELVKQAVAEQRYRFTRVALEGGAELGMGMADMLAVISALSSRDFFKSMTTYADHTTWQDVYRPETEFGQV
YLKFTLVADLLIVSFKEK

Download         Length: 297 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14680.63 Da        Isoelectric Point: 7.0624

>AT274891 WP_277374390.1 NZ_CP120359:1878271-1878672 [Pseudomonas sp. AA-38]
MKCPVCGGAELVHDTRDMPFTYKGQTTQIAAVTADWCDACGESLTGPAESERVICAMNEFRQQVNARSGNQELIRSVRKQ
LRLSQREAAELFGGGPNAFSRYERGSTEAPQPLVQLFKILGRHPELINELRAG

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References