Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | HipBST/HipA(toxin) |
Location | 166064..167294 | Replicon | chromosome |
Accession | NZ_CP119766 | ||
Organism | Flavobacterium sp. CJ75 |
Toxin (Protein)
Gene name | HipT | Uniprot ID | - |
Locus tag | P2W65_RS00840 | Protein ID | WP_289662830.1 |
Coordinates | 166064..166987 (-) | Length | 308 a.a. |
Antitoxin (Protein)
Gene name | HipS | Uniprot ID | - |
Locus tag | P2W65_RS00845 | Protein ID | WP_289662832.1 |
Coordinates | 166980..167294 (-) | Length | 105 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
P2W65_RS00825 | 161875..164493 | + | 2619 | WP_289662825.1 | TonB-dependent receptor | - |
P2W65_RS00830 | 164498..165337 | + | 840 | WP_289662827.1 | DUF4249 domain-containing protein | - |
P2W65_RS00835 | 165451..166047 | - | 597 | WP_289662829.1 | hypothetical protein | - |
P2W65_RS00840 | 166064..166987 | - | 924 | WP_289662830.1 | HipA domain-containing protein | Toxin |
P2W65_RS00845 | 166980..167294 | - | 315 | WP_289662832.1 | HipA N-terminal domain-containing protein | Antitoxin |
P2W65_RS00850 | 167298..167507 | - | 210 | WP_289662834.1 | helix-turn-helix domain-containing protein | - |
P2W65_RS00855 | 167736..169538 | - | 1803 | WP_289662835.1 | glycoside hydrolase family 2 TIM barrel-domain containing protein | - |
P2W65_RS00860 | 169962..171380 | - | 1419 | WP_289662836.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 308 a.a. Molecular weight: 35480.15 Da Isoelectric Point: 9.6681
>T274441 WP_289662830.1 NZ_CP119766:c166987-166064 [Flavobacterium sp. CJ75]
MNRCPITYELCGDGLYSSKGLRMLSPKLNSFHNLPFSASEQRQEAVNRASKLSIQGVQPKLSAVLSIKKQQFDIVDQFGN
FIIKPQSDIFPELPENEDLTMRMAKLYGIDVPLHGLVYSKDDSKSYFIKRFDRYSKGRKFATEDFAQLTGSSRDTKYNFT
MEKIVKVLDDFCTFPSIEKAALFKRVLFCFITGNEDMHLKNFSLITKSGKTTLAPAYDFLNSSIAIKKPQEEMALKLKGK
KSNFKAVDLIDYFAKERLGLNDKIIEQIIKKMFDNVEKWNELIEFSFLSEDMKEKYFKLLKERVGRF
MNRCPITYELCGDGLYSSKGLRMLSPKLNSFHNLPFSASEQRQEAVNRASKLSIQGVQPKLSAVLSIKKQQFDIVDQFGN
FIIKPQSDIFPELPENEDLTMRMAKLYGIDVPLHGLVYSKDDSKSYFIKRFDRYSKGRKFATEDFAQLTGSSRDTKYNFT
MEKIVKVLDDFCTFPSIEKAALFKRVLFCFITGNEDMHLKNFSLITKSGKTTLAPAYDFLNSSIAIKKPQEEMALKLKGK
KSNFKAVDLIDYFAKERLGLNDKIIEQIIKKMFDNVEKWNELIEFSFLSEDMKEKYFKLLKERVGRF
Download Length: 924 bp
Antitoxin
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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