273299

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 3926784..3927484 Replicon chromosome
Accession NZ_CP118607
Organism Pseudomonas sp. PSKL.D1

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag PVV54_RS17450 Protein ID WP_274906458.1
Coordinates 3927188..3927484 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag PVV54_RS17445 Protein ID WP_274906457.1
Coordinates 3926784..3927185 (-) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PVV54_RS17425 (PVV54_17425) 3921926..3922747 - 822 WP_274906453.1 transporter substrate-binding domain-containing protein -
PVV54_RS17430 (PVV54_17430) 3922823..3923752 - 930 WP_274906454.1 FAD-binding protein -
PVV54_RS17435 (PVV54_17435) 3923753..3924502 - 750 WP_274906455.1 electron transfer flavoprotein subunit beta/FixA family protein -
PVV54_RS17440 (PVV54_17440) 3925042..3926724 + 1683 WP_274906456.1 electron transfer flavoprotein-ubiquinone oxidoreductase -
PVV54_RS17445 (PVV54_17445) 3926784..3927185 - 402 WP_274906457.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
PVV54_RS17450 (PVV54_17450) 3927188..3927484 - 297 WP_274906458.1 type II toxin-antitoxin system MqsR family toxin Toxin
PVV54_RS17455 (PVV54_17455) 3927579..3928904 - 1326 WP_274906459.1 MFS transporter -
PVV54_RS17460 (PVV54_17460) 3928975..3929454 - 480 WP_274906460.1 histidine kinase -
PVV54_RS17465 (PVV54_17465) 3929624..3930100 - 477 WP_274906461.1 sigma-70 family RNA polymerase sigma factor -
PVV54_RS17470 (PVV54_17470) 3930312..3931484 + 1173 WP_274906462.1 efflux RND transporter periplasmic adaptor subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(2-97)

Antitoxin

Cro/C1-type helix-turn-helix domain

(74-127)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11150.06 Da        Isoelectric Point: 9.6251

>T273299 WP_274906458.1 NZ_CP118607:c3927484-3927188 [Pseudomonas sp. PSKL.D1]
MEKRMPHCPLERVKALAAEGRVGVTGTALRGARTLGMDFPGILEVVARLERTDFFKSMTSHIDHRVWQDVYRRLTATGYV
YLKVSVIDEVLIVSFKEL

Download         Length: 297 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14451.52 Da        Isoelectric Point: 5.1967

>AT273299 WP_274906457.1 NZ_CP118607:c3927185-3926784 [Pseudomonas sp. PSKL.D1]
MRCPACGGAELAPDVQGMPYSYKGVATVITGVSGDYCSACGECVLGHDEAMRVSTLMTAFERQVNATVVDPSFIVSIRRK
FDLDQREAGEIFGGGVNAFSRYENGKTTPPVALIKLFKLLDRHPELFEEVRTA

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References