Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 2186840..2187053 | Replicon | chromosome |
Accession | NZ_CP118167 | ||
Organism | Bacillus subtilis strain 21855 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | A0A6H0WKE8 |
Locus tag | PUW21_RS11235 | Protein ID | WP_032721653.1 |
Coordinates | 2186877..2187053 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 2186840..2186936 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PUW21_RS11185 | 2182549..2182776 | - | 228 | WP_059293799.1 | helix-turn-helix transcriptional regulator | - |
PUW21_RS11190 | 2183007..2183318 | - | 312 | WP_059293798.1 | hypothetical protein | - |
PUW21_RS11195 | 2183446..2183772 | - | 327 | WP_059293797.1 | hypothetical protein | - |
PUW21_RS11200 | 2183787..2184062 | - | 276 | WP_059293796.1 | hypothetical protein | - |
PUW21_RS11205 | 2184088..2184312 | - | 225 | WP_226465935.1 | hypothetical protein | - |
PUW21_RS11210 | 2184305..2184436 | - | 132 | WP_268396230.1 | hypothetical protein | - |
PUW21_RS11215 | 2184484..2184738 | - | 255 | WP_032677190.1 | hypothetical protein | - |
PUW21_RS11220 | 2185079..2186296 | - | 1218 | WP_160245139.1 | hypothetical protein | - |
PUW21_RS11225 | 2186378..2186566 | - | 189 | WP_114168610.1 | hypothetical protein | - |
PUW21_RS11230 | 2186611..2186862 | - | 252 | WP_080010576.1 | hypothetical protein | - |
- | 2186840..2186936 | + | 97 | - | - | Antitoxin |
PUW21_RS11235 | 2186877..2187053 | - | 177 | WP_032721653.1 | hypothetical protein | Toxin |
- | 2186994..2187094 | + | 101 | NuclAT_0 | - | - |
- | 2186994..2187094 | + | 101 | NuclAT_0 | - | - |
- | 2186994..2187094 | + | 101 | NuclAT_0 | - | - |
- | 2186994..2187094 | + | 101 | NuclAT_0 | - | - |
PUW21_RS11240 | 2188079..2188273 | + | 195 | WP_004399291.1 | hypothetical protein | - |
PUW21_RS11245 | 2188313..2190838 | + | 2526 | WP_274357892.1 | hypothetical protein | - |
PUW21_RS11250 | 2191091..2191366 | + | 276 | WP_032721646.1 | HU family DNA-binding protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2120487..2245041 | 124554 | |
- | inside | Prophage | - | - | 2120487..2243085 | 122598 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6850.39 Da Isoelectric Point: 12.8833
>T272931 WP_032721653.1 NZ_CP118167:c2187053-2186877 [Bacillus subtilis]
VLEKVGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKVGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
Antitoxin
Download Length: 97 bp
>AT272931 NZ_CP118167:2186840-2186936 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCGTGTTATCTGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCGC
TTGCGTATACGCTTTTT
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCGTGTTATCTGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCGC
TTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|