Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-YefM |
| Location | 2997922..2998430 | Replicon | chromosome |
| Accession | NZ_CP117709 | ||
| Organism | Streptomyces sp. MMBL 11-1 | ||
Toxin (Protein)
| Gene name | yoeB | Uniprot ID | - |
| Locus tag | PSQ21_RS12835 | Protein ID | WP_274030628.1 |
| Coordinates | 2998170..2998430 (+) | Length | 87 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | V6U6C9 |
| Locus tag | PSQ21_RS12830 | Protein ID | WP_006125193.1 |
| Coordinates | 2997922..2998173 (+) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSQ21_RS12820 | 2994233..2995894 | - | 1662 | WP_274030626.1 | PQQ-binding-like beta-propeller repeat protein | - |
| PSQ21_RS12825 | 2995962..2997782 | - | 1821 | WP_274030627.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| PSQ21_RS12830 | 2997922..2998173 | + | 252 | WP_006125193.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
| PSQ21_RS12835 | 2998170..2998430 | + | 261 | WP_274030628.1 | Txe/YoeB family addiction module toxin | Toxin |
| PSQ21_RS12840 | 2998843..2999364 | + | 522 | WP_274030629.1 | PASTA domain-containing protein | - |
| PSQ21_RS12845 | 2999420..3000325 | - | 906 | WP_274035732.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| PSQ21_RS12850 | 3000331..3001203 | - | 873 | WP_274030630.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| PSQ21_RS12855 | 3001279..3002145 | - | 867 | WP_274030632.1 | TatD family hydrolase | - |
| PSQ21_RS12860 | 3002305..3002676 | - | 372 | WP_274030633.1 | hypothetical protein | - |
| PSQ21_RS12865 | 3003130..3003306 | + | 177 | WP_274030634.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|