Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) bsrE-as-bsrE/-
Location 1887013..1887259 Replicon chromosome
Accession NZ_CP116869
Organism Bacillus subtilis subsp. subtilis strain MGP001

Toxin (Protein)


Gene name bsrE Uniprot ID -
Locus tag PPM34_RS09375 Protein ID WP_109789044.1
Coordinates 1887013..1887105 (+) Length 31 a.a.

Antitoxin (RNA)


Gene name as-bsrE
Locus tag -
Coordinates 1887086..1887259 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PPM34_RS09360 1882172..1882507 + 336 WP_009967409.1 hypothetical protein -
PPM34_RS09365 1882554..1886159 - 3606 WP_004399367.1 P-loop NTPase fold protein -
PPM34_RS09370 1886392..1886724 - 333 WP_026009814.1 hypothetical protein -
PPM34_RS09375 1887013..1887105 + 93 WP_109789044.1 type I toxin-antitoxin system toxin BsrE Toxin
- 1887086..1887259 - 174 - - Antitoxin
PPM34_RS09380 1887374..1888216 - 843 WP_003231327.1 hypothetical protein -
PPM34_RS09385 1888416..1888874 - 459 WP_003231326.1 type VII secretion system immunity protein YobK -
PPM34_RS09390 1888884..1890686 - 1803 WP_004399481.1 LXG family T7SS effector ribonuclease toxin YobL -
PPM34_RS09395 1890788..1891345 - 558 WP_004399321.1 SMI1/KNR4 family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 1872998..1896676 23678


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(1-24)


Sequences

Toxin        


Download         Length: 31 a.a.        Molecular weight: 3358.16 Da        Isoelectric Point: 4.1840

>T269294 WP_109789044.1 NZ_CP116869:1887013-1887105 [Bacillus subtilis subsp. subtilis]
MSTFQALMLMLAIGSFIIALLTYIEKIDLP

Download         Length: 93 bp

Antitoxin


Download         Length: 174 bp

>AT269294 NZ_CP116869:c1887259-1887086 [Bacillus subtilis subsp. subtilis]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References