Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrE-as-bsrE/- |
Location | 1798470..1798716 | Replicon | chromosome |
Accession | NZ_CP116867 | ||
Organism | Bacillus subtilis subsp. subtilis strain MGP008 |
Toxin (Protein)
Gene name | bsrE | Uniprot ID | - |
Locus tag | PPM66_RS09205 | Protein ID | WP_109789044.1 |
Coordinates | 1798470..1798562 (+) | Length | 31 a.a. |
Antitoxin (RNA)
Gene name | as-bsrE | ||
Locus tag | - | ||
Coordinates | 1798543..1798716 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PPM66_RS09190 | 1793629..1793964 | + | 336 | WP_009967409.1 | hypothetical protein | - |
PPM66_RS09195 | 1794011..1797616 | - | 3606 | WP_004399367.1 | P-loop NTPase fold protein | - |
PPM66_RS09200 | 1797849..1798181 | - | 333 | WP_026009814.1 | hypothetical protein | - |
PPM66_RS09205 | 1798470..1798562 | + | 93 | WP_109789044.1 | type I toxin-antitoxin system toxin BsrE | Toxin |
- | 1798543..1798716 | - | 174 | - | - | Antitoxin |
PPM66_RS09210 | 1798831..1799673 | - | 843 | WP_003231327.1 | hypothetical protein | - |
PPM66_RS09215 | 1799873..1800331 | - | 459 | WP_003231326.1 | type VII secretion system immunity protein YobK | - |
PPM66_RS09220 | 1800341..1802143 | - | 1803 | WP_004399481.1 | LXG family T7SS effector ribonuclease toxin YobL | - |
PPM66_RS09225 | 1802245..1802802 | - | 558 | WP_004399321.1 | SMI1/KNR4 family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 1784455..1808133 | 23678 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 31 a.a. Molecular weight: 3358.16 Da Isoelectric Point: 4.1840
>T269286 WP_109789044.1 NZ_CP116867:1798470-1798562 [Bacillus subtilis subsp. subtilis]
MSTFQALMLMLAIGSFIIALLTYIEKIDLP
MSTFQALMLMLAIGSFIIALLTYIEKIDLP
Download Length: 93 bp
Antitoxin
Download Length: 174 bp
>AT269286 NZ_CP116867:c1798716-1798543 [Bacillus subtilis subsp. subtilis]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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