Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-RelB
Location 4867135..4867658 Replicon chromosome
Accession NZ_CP114190
Organism Aminobacter sp. NyZ550

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag N7E70_RS24180 Protein ID WP_055978267.1
Coordinates 4867135..4867407 (-) Length 91 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag N7E70_RS24185 Protein ID WP_263007870.1
Coordinates 4867407..4867658 (-) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N7E70_RS24165 (N7E70_024160) 4862429..4864207 - 1779 WP_263007867.1 acyl-CoA dehydrogenase -
N7E70_RS24170 (N7E70_024165) 4864535..4865731 + 1197 WP_263007868.1 GH25 family lysozyme -
N7E70_RS24175 (N7E70_024170) 4865747..4867024 - 1278 WP_263007869.1 phosphoribosylamine--glycine ligase -
N7E70_RS24180 (N7E70_024175) 4867135..4867407 - 273 WP_055978267.1 Txe/YoeB family addiction module toxin Toxin
N7E70_RS24185 (N7E70_024180) 4867407..4867658 - 252 WP_263007870.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
N7E70_RS24190 (N7E70_024185) 4867760..4868743 + 984 WP_263007871.1 4-hydroxybenzoate octaprenyltransferase -
N7E70_RS24195 (N7E70_024190) 4868744..4869310 - 567 WP_055978260.1 DUF6101 family protein -
N7E70_RS24200 (N7E70_024195) 4869479..4870909 - 1431 WP_263007872.1 FAD-binding oxidoreductase -
N7E70_RS24205 (N7E70_024200) 4870925..4871893 - 969 WP_263007873.1 L-threonylcarbamoyladenylate synthase -
N7E70_RS24210 (N7E70_024205) 4872064..4872456 + 393 WP_263007874.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-88)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 91 a.a.        Molecular weight: 10540.95 Da        Isoelectric Point: 9.4955

>T266414 WP_055978267.1 NZ_CP114190:c4867407-4867135 [Aminobacter sp. NyZ550]
MRIIFSEASWSDYLFWQQADKAVCDRINELIKDARRSPFVGIGKPEPLSGNYSGFWSRRITREHRLVYRVTGKGDAQALE
IAACRYHYDR

Download         Length: 273 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9364.59 Da        Isoelectric Point: 4.8563

>AT266414 WP_263007870.1 NZ_CP114190:c4867658-4867407 [Aminobacter sp. NyZ550]
MTHVTLTELRANMAKYLDKVEADRTELVVTRQNHEPVVVMALSELEGLRETLHLLSSRANAEHLQRSIDELNAGSGVERD
LIE

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References