Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
| Location | 144200..144723 | Replicon | chromosome |
| Accession | NZ_CP113942 | ||
| Organism | Bifidobacterium sp. ESL0682 | ||
Toxin (Protein)
| Gene name | yoeB | Uniprot ID | - |
| Locus tag | OZX57_RS00545 | Protein ID | WP_277162285.1 |
| Coordinates | 144460..144723 (+) | Length | 88 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | - |
| Locus tag | OZX57_RS00540 | Protein ID | WP_277162877.1 |
| Coordinates | 144200..144463 (+) | Length | 88 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OZX57_RS00540 (OZX57_00540) | 144200..144463 | + | 264 | WP_277162877.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| OZX57_RS00545 (OZX57_00545) | 144460..144723 | + | 264 | WP_277162285.1 | Txe/YoeB family addiction module toxin | Toxin |
| OZX57_RS00550 (OZX57_00550) | 145464..146228 | + | 765 | WP_277162286.1 | glucose 1-dehydrogenase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 144200..153326 | 9126 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|
Antitoxin
| Source | ID | Structure |
|---|