Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) DinJ-YafQ (relBE)/YafQ-DinJ
Location 1125073..1125604 Replicon chromosome
Accession NZ_CP113939
Organism Bifidobacterium sp. ESL0690

Toxin (Protein)


Gene name yafQ Uniprot ID -
Locus tag OZX62_RS04510 Protein ID WP_277176830.1
Coordinates 1125314..1125604 (+) Length 97 a.a.

Antitoxin (Protein)


Gene name dinJ Uniprot ID -
Locus tag OZX62_RS04505 Protein ID WP_277176829.1
Coordinates 1125073..1125333 (+) Length 87 a.a.

Genomic Context


OZX62_RS04485OZX62_RS04495OZX62_RS04500OZX62_RS04505OZX62_RS04510OZX62_RS04490OZX62_RS04515OZX62_RS04520OZX62_RS04525OZX62_RS04530OZX62_RS04535
Location: 1120462..1121658 (1197 bp)
Type: Others
Protein ID: WP_277176825.1
Location: 1122305..1124197 (1893 bp)
Type: Others
Protein ID: WP_277176827.1
Location: 1124299..1124991 (693 bp)
Type: Others
Protein ID: WP_277176828.1
Location: 1125073..1125333 (261 bp)
Type: Antitoxin
Protein ID: WP_277176829.1
Location: 1125314..1125604 (291 bp)
Type: Toxin
Protein ID: WP_277176830.1
Location: 1121787..1122047 (261 bp)
Type: Others
Protein ID: WP_277176826.1
Location: 1125622..1126926 (1305 bp)
Type: Others
Protein ID: WP_277176831.1
Location: 1127104..1127514 (411 bp)
Type: Others
Protein ID: WP_277176832.1
Location: 1127574..1129271 (1698 bp)
Type: Others
Protein ID: WP_277176833.1
Location: 1129389..1129622 (234 bp)
Type: Others
Protein ID: WP_277176834.1
Location: 1129699..1130442 (744 bp)
Type: Others
Protein ID: WP_277176835.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
OZX62_RS04485 (OZX62_04485)1120462..1121658+1197WP_277176825.1type II CAAX endopeptidase family protein-
OZX62_RS04490 (OZX62_04490)1121787..1122047-261WP_277176826.130S ribosomal protein S20-
OZX62_RS04495 (OZX62_04495)1122305..1124197+1893WP_277176827.1translation elongation factor 4-
OZX62_RS04500 (OZX62_04500)1124299..1124991+693WP_277176828.1nitroreductase family protein-
OZX62_RS04505 (OZX62_04505)1125073..1125333+261WP_277176829.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
OZX62_RS04510 (OZX62_04510)1125314..1125604+291WP_277176830.1type II toxin-antitoxin system YafQ family toxinToxin
OZX62_RS04515 (OZX62_04515)1125622..1126926-1305WP_277176831.1AAA family ATPase-
OZX62_RS04520 (OZX62_04520)1127104..1127514-411WP_277176832.1hypothetical protein-
OZX62_RS04525 (OZX62_04525)1127574..1129271-1698WP_277176833.1zinc-ribbon domain-containing protein-
OZX62_RS04530 (OZX62_04530)1129389..1129622-234WP_277176834.1hypothetical protein-
OZX62_RS04535 (OZX62_04535)1129699..1130442-744WP_277176835.1response regulator transcription factor-

Associated MGEs


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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(5-94)

Antitoxin

(1-80)


Sequences


Toxin        


Download         Length: 97 a.a.        Molecular weight: 11516.42 Da        Isoelectric Point: 10.5771

>T266176 WP_277176830.1 NZ_CP113939:1125314-1125604 [Bifidobacterium sp. ESL0690]
VALQQIERTATFLRQAKQLRRKHYDFDKLEKVIRLLMAQDHEVLRRRYRDHALKGNLRNFRELHIEADWLLIYQIKGDVL
TLVLVETGSHQQLLGK

Download         Length: 291 bp


Antitoxin


Download         Length: 87 a.a.        Molecular weight: 9516.84 Da        Isoelectric Point: 5.0323

>AT266176 WP_277176829.1 NZ_CP113939:1125073-1125333 [Bifidobacterium sp. ESL0690]
MNSATIAIRTDPQIKKQAQEVFKGLGLDMSSAINMFLQQTINDRGLPFRPTLSKFEKGVLDAAEGPTRSFDNIDDLMKEL
RGTATD

Download         Length: 261 bp


Similar Proteins


Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures


Toxin

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Source
ID
Structure
No matching records found


Antitoxin

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Source
ID
Structure
No matching records found

References