Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/Txe-RelB
Location 171534..172057 Replicon chromosome
Accession NZ_CP113918
Organism Bifidobacterium sp. ESL0769

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag OZX72_RS00595 Protein ID WP_277158541.1
Coordinates 171794..172057 (+) Length 88 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag OZX72_RS00590 Protein ID WP_277158540.1
Coordinates 171534..171797 (+) Length 88 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OZX72_RS00575 (OZX72_00575) 167416..167664 - 249 WP_277158539.1 hypothetical protein -
OZX72_RS00590 (OZX72_00590) 171534..171797 + 264 WP_277158540.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
OZX72_RS00595 (OZX72_00595) 171794..172057 + 264 WP_277158541.1 Txe/YoeB family addiction module toxin Toxin
OZX72_RS00600 (OZX72_00600) 172599..172799 - 201 WP_277158542.1 hypothetical protein -
OZX72_RS00610 (OZX72_00610) 174406..174654 - 249 WP_277158539.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(24-86)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-68)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10284.60 Da        Isoelectric Point: 9.8767

>T266161 WP_277158541.1 NZ_CP113918:171794-172057 [Bifidobacterium sp. ESL0769]
VTYHVVIKNSAKSDLKKLKRSHLQQSFMQVVADLKSDPYQPTQSFEKLQPVSRRLYSRRINSQHRVVYDIDDDTQTVTIY
AAWSHYE

Download         Length: 264 bp

Antitoxin


Download         Length: 88 a.a.        Molecular weight: 9784.86 Da        Isoelectric Point: 4.3286

>AT266161 WP_277158540.1 NZ_CP113918:171534-171797 [Bifidobacterium sp. ESL0769]
MDTYTPTAARKNLYQILKDVNVQRKPVVISPARGNKDEEAVVVNRADWNSIMETLYLENTGALATAEKRRADDSGTTDID
DIDWDTL

Download         Length: 264 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References