266154

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/Txe-RelB
Location 153905..154428 Replicon chromosome
Accession NZ_CP113914
Organism Bifidobacterium sp. ESL0798

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag OZX74_RS00545 Protein ID WP_277156668.1
Coordinates 154165..154428 (+) Length 88 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag OZX74_RS00540 Protein ID WP_277156667.1
Coordinates 153905..154168 (+) Length 88 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OZX74_RS00530 (OZX74_00530) 152735..153043 + 309 WP_277156665.1 GNAT family N-acetyltransferase -
OZX74_RS00535 (OZX74_00535) 153258..153704 + 447 WP_277156666.1 GNAT family N-acetyltransferase -
OZX74_RS00540 (OZX74_00540) 153905..154168 + 264 WP_277156667.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
OZX74_RS00545 (OZX74_00545) 154165..154428 + 264 WP_277156668.1 Txe/YoeB family addiction module toxin Toxin

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - - 144575..164166 19591


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(24-86)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-62)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10189.55 Da        Isoelectric Point: 10.3525

>T266154 WP_277156668.1 NZ_CP113914:154165-154428 [Bifidobacterium sp. ESL0798]
VTYRVAIKNSAKTDLKKLKRSHLQQSFMQVVADLKSDPYQPTQSFEKLQPASRGLYSRRINSQHRVVYDVDDRTKTVTIY
AAWSHYE

Download         Length: 264 bp

Antitoxin


Download         Length: 88 a.a.        Molecular weight: 9829.92 Da        Isoelectric Point: 4.2931

>AT266154 WP_277156667.1 NZ_CP113914:153905-154168 [Bifidobacterium sp. ESL0798]
MDTYTPTAARKNLYQILKDVNVQRKPVVISPARGNKDEEAVVVNRADWNSMIETLYLENTGTLATAENRRADNSGTTDID
DIDWDML

Download         Length: 264 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References