Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2684541..2684939 Replicon chromosome
Accession NZ_CP113832
Organism Enterococcus faecalis strain M61

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag OZF29_RS12995 Protein ID WP_021164545.1
Coordinates 2684835..2684939 (+) Length 35 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2684541..2684695 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OZF29_RS12975 (2679684) 2679684..2679899 - 216 WP_002354768.1 zinc ribbon domain-containing protein -
OZF29_RS12980 (2680038) 2680038..2681030 + 993 WP_002358973.1 biotin--[acetyl-CoA-carboxylase] ligase -
OZF29_RS12985 (2681294) 2681294..2681932 - 639 WP_002375448.1 lytic polysaccharide monooxygenase -
OZF29_RS12990 (2682617) 2682617..2684233 + 1617 WP_010778027.1 phosphatase PAP2/LCP family protein -
- (2684507) 2684507..2684683 - 177 NuclAT_14 - -
- (2684541) 2684541..2684695 - 155 NuclAT_7 - Antitoxin
OZF29_RS12995 (2684835) 2684835..2684939 + 105 WP_021164545.1 putative holin-like toxin Toxin
- (2684872) 2684872..2685127 - 256 NuclAT_0 - -
OZF29_RS13000 (2685129) 2685129..2688887 - 3759 WP_116495142.1 WxL domain-containing protein -
- (2689228) 2689228..2689372 - 145 NuclAT_5 - -
- (2689230) 2689230..2689372 - 143 NuclAT_15 - -
OZF29_RS13005 (2689483) 2689483..2689626 + 144 WP_002387585.1 putative holin-like toxin -
- (2689601) 2689601..2689815 - 215 NuclAT_2 - -
- (2689767) 2689767..2689816 + 50 NuclAT_18 - -
- (2689558) 2689558..2689817 - 260 NuclAT_13 - -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(1-34)


Sequences


Toxin        


Download         Length: 35 a.a.        Molecular weight: 3813.70 Da        Isoelectric Point: 10.3686

>T266118 WP_021164545.1 NZ_CP113832:2684835-2684939 [Enterococcus faecalis]
MSAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 105 bp


Antitoxin


Download         Length: 155 bp

>AT266118 NZ_CP113832:c2684695-2684541 [Enterococcus faecalis]
TTTTTAGGTAAGTGTGCTATAATAGCAATGAAAAGAGAGGTATGCGCCAACATACCTCTCTAGTGTAGAGTGGTTTAAGA
CGGTGACCTTTTGGATTATTTAAAAATAACCGTACTTGGTCAAAGTAGACGGTTATTTTTTCTTGTCTTCTTTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References