Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacAT/DUF1778(antitoxin)
Location 770911..771686 Replicon chromosome
Accession NZ_CP113216
Organism Klebsiella pneumoniae strain SCLC9-2

Toxin (Protein)


Gene name TacT2 Uniprot ID A0A1Q4Q548
Locus tag OT489_RS03880 Protein ID WP_004150910.1
Coordinates 771201..771686 (+) Length 162 a.a.

Antitoxin (Protein)


Gene name TacA2 Uniprot ID W8UEW1
Locus tag OT489_RS03875 Protein ID WP_004150912.1
Coordinates 770911..771204 (+) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OT489_RS03855 (766119) 766119..766721 - 603 WP_002916735.1 short chain dehydrogenase -
OT489_RS03860 (766819) 766819..767730 + 912 WP_004188550.1 LysR family transcriptional regulator -
OT489_RS03865 (767731) 767731..768879 - 1149 WP_004150915.1 PLP-dependent aspartate aminotransferase family protein -
OT489_RS03870 (768890) 768890..770266 - 1377 WP_004217775.1 cystathionine beta-synthase -
OT489_RS03875 (770911) 770911..771204 + 294 WP_004150912.1 DUF1778 domain-containing protein Antitoxin
OT489_RS03880 (771201) 771201..771686 + 486 WP_004150910.1 GNAT family N-acetyltransferase Toxin
OT489_RS03885 (772390) 772390..772983 + 594 WP_004188553.1 hypothetical protein -
OT489_RS03890 (773080) 773080..773296 + 217 Protein_765 transposase -
OT489_RS03900 (773974) 773974..774687 - 714 WP_002916694.1 DUF554 domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
flank IS/Tn - - 773080..773232 152


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(41-143)

Antitoxin

Vibrio phage ICP1, Orf50

(3-95)


Sequences

Toxin        


Download         Length: 162 a.a.        Molecular weight: 17551.59 Da        Isoelectric Point: 8.8818

>T265609 WP_004150910.1 NZ_CP113216:771201-771686 [Klebsiella pneumoniae]
MISAPEPLHAGHILTPFCCGIDSMDHWLKQRAMKNQVTGASRTFVCCDDAKVMAYYSLASSAVTTNTAPGRFRRNMPAPI
PVVVLGRLAVDKSLHGKGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEARDFYLRVGFEPSPMDPMMLMVTLRDLVN
A

Download         Length: 486 bp

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 10901.46 Da        Isoelectric Point: 6.3783

>AT265609 WP_004150912.1 NZ_CP113216:770911-771204 [Klebsiella pneumoniae]
MPAANSMSIKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYQEFLARLDQAPAPN
AALRKTMQTPAPWEQEE

Download         Length: 294 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A1Q4Q548

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GVL4

References