Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | higBA (relBE)/- |
Location | 2906210..2906624 | Replicon | chromosome |
Accession | NZ_CP113049 | ||
Organism | Staphylococcus aureus strain Ahri |
Toxin (Protein)
Gene name | higB | Uniprot ID | - |
Locus tag | OS089_RS14625 | Protein ID | WP_001065099.1 |
Coordinates | 2906210..2906461 (+) | Length | 84 a.a. |
Antitoxin (Protein)
Gene name | higA | Uniprot ID | - |
Locus tag | OS089_RS14630 | Protein ID | WP_000028424.1 |
Coordinates | 2906451..2906624 (+) | Length | 58 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OS089_RS14575 (2901696) | 2901696..2902553 | - | 858 | WP_000371250.1 | DUF4393 domain-containing protein | - |
OS089_RS14580 (2902618) | 2902618..2903388 | + | 771 | WP_000190224.1 | conserved phage C-terminal domain-containing protein | - |
OS089_RS14585 (2903398) | 2903398..2904177 | + | 780 | WP_103143576.1 | ATP-binding protein | - |
OS089_RS14590 (2904171) | 2904171..2904332 | + | 162 | WP_000237153.1 | hypothetical protein | - |
OS089_RS14595 (2904345) | 2904345..2904566 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
OS089_RS14600 (2904576) | 2904576..2905001 | + | 426 | WP_000451862.1 | DNA N-6-adenine-methyltransferase | - |
OS089_RS14605 (2904998) | 2904998..2905402 | + | 405 | WP_021758092.1 | DUF1064 domain-containing protein | - |
OS089_RS14610 (2905407) | 2905407..2905592 | + | 186 | WP_001187236.1 | DUF3113 family protein | - |
OS089_RS14615 (2905593) | 2905593..2905949 | + | 357 | WP_000029366.1 | SA1788 family PVL leukocidin-associated protein | - |
OS089_RS14620 (2905953) | 2905953..2906195 | + | 243 | WP_000131388.1 | phi PVL orf 51-like protein | - |
OS089_RS14625 (2906210) | 2906210..2906461 | + | 252 | WP_001065099.1 | DUF1024 family protein | Toxin |
OS089_RS14630 (2906451) | 2906451..2906624 | + | 174 | WP_000028424.1 | hypothetical protein | Antitoxin |
OS089_RS14635 (2906625) | 2906625..2906906 | + | 282 | WP_267813972.1 | hypothetical protein | - |
OS089_RS14640 (2906907) | 2906907..2907068 | + | 162 | WP_000889683.1 | hypothetical protein | - |
OS089_RS14645 (2907083) | 2907083..2907589 | + | 507 | WP_001061834.1 | dUTPase | - |
OS089_RS14650 (2907626) | 2907626..2907875 | + | 250 | Protein_2847 | hypothetical protein | - |
OS089_RS14655 (2907872) | 2907872..2908024 | + | 153 | WP_038412600.1 | DUF1381 domain-containing protein | - |
OS089_RS14660 (2908241) | 2908241..2908408 | + | 168 | WP_267813974.1 | hypothetical protein | - |
OS089_RS14665 (2908492) | 2908492..2908665 | + | 174 | WP_000595257.1 | transcriptional activator RinB | - |
OS089_RS14670 (2908666) | 2908666..2909067 | + | 402 | WP_000286968.1 | hypothetical protein | - |
OS089_RS14675 (2909604) | 2909604..2909921 | + | 318 | WP_001806486.1 | hypothetical protein | - |
OS089_RS14680 (2909914) | 2909914..2911139 | + | 1226 | Protein_2853 | PBSX family phage terminase large subunit | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2882964..2922598 | 39634 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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