Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprG-sprF/-
Location 267240..267457 Replicon chromosome
Accession NZ_CP113042
Organism Staphylococcus aureus strain Seraphine

Toxin (Protein)


Gene name SprG3 Uniprot ID Q2FWA7
Locus tag OS079_RS01500 Protein ID WP_001802298.1
Coordinates 267353..267457 (-) Length 35 a.a.

Antitoxin (RNA)


Gene name SprF4
Locus tag -
Coordinates 267240..267295 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OS079_RS01475 263377..264042 - 666 WP_001024094.1 SDR family oxidoreductase -
OS079_RS01480 264194..264514 + 321 WP_000003759.1 Zn(II)-responsive metalloregulatory transcriptional repressor CzrA -
OS079_RS01485 264516..265496 + 981 WP_000019744.1 CDF family zinc efflux transporter CzrB -
OS079_RS01490 265762..266853 + 1092 WP_000495671.1 lytic regulatory protein -
- 267240..267295 + 56 - - Antitoxin
OS079_RS01500 267353..267457 - 105 WP_001802298.1 hypothetical protein Toxin
OS079_RS01505 267618..268101 - 484 Protein_290 recombinase family protein -
OS079_RS01510 268144..269280 - 1137 WP_000115564.1 SAP domain-containing protein -
OS079_RS01515 269569..269661 + 93 WP_001790138.1 hypothetical protein -
OS079_RS01520 269950..270134 + 185 Protein_293 exotoxin -
OS079_RS01525 270366..271223 - 858 WP_000370924.1 HAD family hydrolase -
OS079_RS01530 271291..272073 - 783 WP_000908176.1 ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3906.77 Da        Isoelectric Point: 5.5724

>T265278 WP_001802298.1 NZ_CP113042:c267457-267353 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK

Download         Length: 105 bp

Antitoxin


Download         Length: 56 bp

>AT265278 NZ_CP113042:267240-267295 [Staphylococcus aureus]
AAAAAGGGCAACACTCGGAAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2I7Y9L9

Antitoxin

Download structure file

References