Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
Location | 803350..803873 | Replicon | chromosome |
Accession | NZ_CP113029 | ||
Organism | Staphylococcus aureus strain Zoe |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | X5DYX7 |
Locus tag | OS075_RS04005 | Protein ID | WP_000074048.1 |
Coordinates | 803607..803873 (+) | Length | 89 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | W8TQT5 |
Locus tag | OS075_RS04000 | Protein ID | WP_000587616.1 |
Coordinates | 803350..803607 (+) | Length | 86 a.a. |
Genomic Context
Location: 798430..799623 (1194 bp)
Type: Others
Protein ID: WP_000675401.1
Type: Others
Protein ID: WP_000675401.1
Location: 800791..802368 (1578 bp)
Type: Others
Protein ID: WP_000143503.1
Type: Others
Protein ID: WP_000143503.1
Location: 803050..803244 (195 bp)
Type: Others
Protein ID: WP_001790145.1
Type: Others
Protein ID: WP_001790145.1
Location: 803350..803607 (258 bp)
Type: Antitoxin
Protein ID: WP_000587616.1
Type: Antitoxin
Protein ID: WP_000587616.1
Location: 803607..803873 (267 bp)
Type: Toxin
Protein ID: WP_000074048.1
Type: Toxin
Protein ID: WP_000074048.1
Location: 804228..805304 (1077 bp)
Type: Others
Protein ID: WP_001076671.1
Type: Others
Protein ID: WP_001076671.1
Location: 805552..806214 (663 bp)
Type: Others
Protein ID: WP_000923520.1
Type: Others
Protein ID: WP_000923520.1
Location: 806207..806983 (777 bp)
Type: Others
Protein ID: WP_000072147.1
Type: Others
Protein ID: WP_000072147.1
Location: 807379..808566 (1188 bp)
Type: Others
Protein ID: WP_000026194.1
Type: Others
Protein ID: WP_000026194.1
Location: 799847..800596 (750 bp)
Type: Others
Protein ID: WP_000072444.1
Type: Others
Protein ID: WP_000072444.1
Location: 802536..802991 (456 bp)
Type: Others
Protein ID: WP_000732082.1
Type: Others
Protein ID: WP_000732082.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OS075_RS03975 (798430) | 798430..799623 | + | 1194 | WP_000675401.1 | MFS transporter | - |
OS075_RS03980 (799847) | 799847..800596 | - | 750 | WP_000072444.1 | CPBP family lipoprotein N-acylation protein LnsB | - |
OS075_RS03985 (800791) | 800791..802368 | + | 1578 | WP_000143503.1 | FMN-binding glutamate synthase family protein | - |
OS075_RS03990 (802536) | 802536..802991 | - | 456 | WP_000732082.1 | DUF1307 domain-containing protein | - |
OS075_RS03995 (803050) | 803050..803244 | + | 195 | WP_001790145.1 | hypothetical protein | - |
OS075_RS04000 (803350) | 803350..803607 | + | 258 | WP_000587616.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
OS075_RS04005 (803607) | 803607..803873 | + | 267 | WP_000074048.1 | Txe/YoeB family addiction module toxin | Toxin |
OS075_RS04010 (804228) | 804228..805304 | + | 1077 | WP_001076671.1 | M42 family metallopeptidase | - |
OS075_RS04015 (805552) | 805552..806214 | + | 663 | WP_000923520.1 | ATP-binding cassette domain-containing protein | - |
OS075_RS04020 (806207) | 806207..806983 | + | 777 | WP_000072147.1 | iron export ABC transporter permease subunit FetB | - |
OS075_RS04025 (807379) | 807379..808566 | + | 1188 | WP_000026194.1 | MFS transporter | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
No matching records found |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.