Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 996426..996588 Replicon chromosome
Accession NZ_CP110784
Organism Staphylococcus capitis strain CCSM0123

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag OP858_RS04940 Protein ID WP_016898319.1
Coordinates 996426..996530 (+) Length 35 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 996558..996588 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OP858_RS04930 (OP858_04930) 992358..995297 + 2940 WP_016898320.1 AAA family ATPase -
OP858_RS04935 (OP858_04935) 995294..996235 + 942 WP_002434737.1 3'-5' exoribonuclease YhaM -
OP858_RS04940 (OP858_04940) 996426..996530 + 105 WP_016898319.1 type I toxin-antitoxin system Fst family toxin Toxin
- 996558..996588 + 31 - - Antitoxin
OP858_RS04945 (OP858_04945) 996685..997686 - 1002 WP_002453569.1 peptidylprolyl isomerase -
OP858_RS04950 (OP858_04950) 997885..998454 - 570 WP_002453568.1 DUF3267 domain-containing protein -
OP858_RS04955 (OP858_04955) 998646..999017 - 372 WP_002434824.1 YtxH domain-containing protein -
OP858_RS04960 (OP858_04960) 999095..999520 - 426 WP_002434751.1 HIT family protein -
OP858_RS04965 (OP858_04965) 999653..1000393 + 741 WP_267263570.1 ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3993.76 Da        Isoelectric Point: 10.7588

>T264223 WP_016898319.1 NZ_CP110784:996426-996530 [Staphylococcus capitis]
MLFDIFVHIMTTATSGCIVALFAHWLRTRNDKRK

Download         Length: 105 bp

Antitoxin


Download         Length: 31 bp

>AT264223 NZ_CP110784:996558-996588 [Staphylococcus capitis]
AAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References