264071

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-RelB
Location 20904..21405 Replicon plasmid unnamed
Accession NZ_CP110646
Organism Aeromonas salmonicida strain AS3

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag ONZ54_RS22715 Protein ID WP_271788386.1
Coordinates 20904..21179 (-) Length 92 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag ONZ54_RS22720 Protein ID WP_271788387.1
Coordinates 21160..21405 (-) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ONZ54_RS22705 (ONZ54_22715) 18196..19890 + 1695 WP_271788384.1 portal protein -
ONZ54_RS22710 (ONZ54_22720) 19887..20855 + 969 WP_271788385.1 hypothetical protein -
ONZ54_RS22715 (ONZ54_22725) 20904..21179 - 276 WP_271788386.1 Txe/YoeB family addiction module toxin Toxin
ONZ54_RS22720 (ONZ54_22730) 21160..21405 - 246 WP_271788387.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
ONZ54_RS22725 (ONZ54_22735) 21481..21765 - 285 WP_271788388.1 chromosome segregation protein ParM -
ONZ54_RS22730 (ONZ54_22740) 22312..22449 + 138 WP_271788389.1 hypothetical protein -
ONZ54_RS22735 (ONZ54_22745) 22916..23791 - 876 WP_271788390.1 protein RepA -
ONZ54_RS22740 (ONZ54_22750) 24633..24929 + 297 WP_271788391.1 hypothetical protein -
ONZ54_RS22745 (ONZ54_22755) 24926..25354 + 429 WP_271788392.1 hypothetical protein -
ONZ54_RS22750 (ONZ54_22760) 25354..26130 + 777 WP_271788393.1 MT-A70 family methyltransferase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..88346 88346


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(8-88)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 92 a.a.        Molecular weight: 10550.98 Da        Isoelectric Point: 9.9947

>T264071 WP_271788386.1 NZ_CP110646:c21179-20904 [Aeromonas salmonicida]
MSQWTINFTPNGAADFAYWQEIDQQKVERIKALLHSIKADPLSGIGKPERLRHHKNPALYSRRIDREHRLVYSVSNGTVT
VVACRYHYGDK

Download         Length: 276 bp

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 9110.24 Da        Isoelectric Point: 4.5349

>AT264071 WP_271788387.1 NZ_CP110646:c21405-21160 [Aeromonas salmonicida]
MHTLTFSDARKHFADTMSRVTNDAQPVRIMRRDAPDVIIVDAGEYEAMLETIYLFGNPANAAHLNESLAQLERGEVVTVD
Y

Download         Length: 246 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References