Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/COG4683-HTH_37
Location 3008257..3008917 Replicon chromosome
Accession NZ_CP110354
Organism Enterobacter hormaechei strain ECC2783

Toxin (Protein)


Gene name higB Uniprot ID A0A2J0Q4X0
Locus tag OLI86_RS14720 Protein ID WP_017383312.1
Coordinates 3008564..3008917 (-) Length 118 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID A0A2J0Q4Z7
Locus tag OLI86_RS14715 Protein ID WP_017383313.1
Coordinates 3008257..3008559 (-) Length 101 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OLI86_RS14700 (OLI86_14700) 3004431..3005756 + 1326 WP_032619371.1 SidA/IucD/PvdA family monooxygenase -
OLI86_RS14705 (OLI86_14705) 3005783..3007972 + 2190 WP_023303946.1 TonB-dependent siderophore receptor -
OLI86_RS14715 (OLI86_14715) 3008257..3008559 - 303 WP_017383313.1 XRE family transcriptional regulator Antitoxin
OLI86_RS14720 (OLI86_14720) 3008564..3008917 - 354 WP_017383312.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OLI86_RS14725 (OLI86_14725) 3009108..3010058 - 951 WP_032619370.1 HTH-type transcriptional regulator Cbl -
OLI86_RS14730 (OLI86_14730) 3010155..3011072 - 918 WP_003859531.1 nitrogen assimilation transcriptional regulator NAC -
OLI86_RS14740 (OLI86_14740) 3011604..3012536 - 933 WP_023303950.1 L,D-transpeptidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(12-106)

Antitoxin

HigA2-like, helix-turn-helix domain

(18-89)


Sequences

Toxin        


Download         Length: 118 a.a.        Molecular weight: 13537.37 Da        Isoelectric Point: 9.9538

>T263704 WP_017383312.1 NZ_CP110354:c3008917-3008564 [Enterobacter hormaechei]
VWAIKTTDRFDDWFTSLNDSERASVLAALLVLRERGPGLSRPYADTLKGSRHSNMKELRIQSKGDPLRAFFAFDPNRTGI
VLCAGNKVGNERRFYDEMLLVADREYTRWLNTLKERN

Download         Length: 354 bp

Antitoxin


Download         Length: 101 a.a.        Molecular weight: 11028.85 Da        Isoelectric Point: 6.4727

>AT263704 WP_017383313.1 NZ_CP110354:c3008559-3008257 [Enterobacter hormaechei]
MGRTLEQLIADEKPEVVASAQAMATDILLNIHLAELREKVQKTQVDMARALGIKQPTVAVMEKAGRDIKLSSLKRYVEAA
GGKLRLDVELPDGSHYEFVL

Download         Length: 303 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2J0Q4X0

Antitoxin

Source ID Structure
AlphaFold DB A0A2J0Q4Z7

References