Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2651111..2651373 Replicon chromosome
Accession NZ_CP110289
Organism Enterococcus faecalis strain AKSZ-208

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag MZO28_RS13190 Protein ID WP_002367458.1
Coordinates 2651230..2651373 (-) Length 48 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2651111..2651297 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MZO28_RS13175 2646568..2649312 + 2745 WP_002411259.1 glycosyl hydrolase family 65 protein -
MZO28_RS13180 2649327..2649977 + 651 WP_002389419.1 beta-phosphoglucomutase -
MZO28_RS13185 2650397..2650990 + 594 WP_002389391.1 PBECR4 domain-containing protein -
- 2651111..2651297 + 187 - - Antitoxin
MZO28_RS13190 2651230..2651373 - 144 WP_002367458.1 type I toxin-antitoxin system toxin PepG1 Toxin
MZO28_RS13195 2651605..2652576 - 972 WP_002381060.1 ribose-phosphate diphosphokinase -
MZO28_RS13200 2652751..2653188 - 438 WP_002389480.1 peptide-methionine (R)-S-oxide reductase MsrB -
MZO28_RS13205 2653321..2653875 - 555 WP_002389433.1 nucleoside triphosphate pyrophosphatase -
MZO28_RS13210 2653900..2656032 - 2133 WP_002389406.1 DNA mismatch repair endonuclease MutL -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-47)


Sequences


Toxin        


Download         Length: 48 a.a.        Molecular weight: 5311.50 Da        Isoelectric Point: 10.8331

>T263568 WP_002367458.1 NZ_CP110289:c2651373-2651230 [Enterococcus faecalis]
MSVLPKFTERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 144 bp


Antitoxin


Download         Length: 187 bp

>AT263568 NZ_CP110289:2651111-2651297 [Enterococcus faecalis]
TGTGCTAGAATGTAGATGAAAAGAGAGATATGCGTCAACATACCTCTCTAGTGTAGAGCCGTTTGAGACGGTGACCGATT
GTATTATTTAAAAATAACCGTACTGGTCAAAGTAGATGGTTATTTTTTCTTGTCATTTTTAAGCAATTTCACAATCAGTG
CAATCAAAGCAATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References