Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mqsRA (relBE)/MqsR-MqsA |
Location | 457960..458666 | Replicon | chromosome |
Accession | NZ_CP109894 | ||
Organism | Xylella fastidiosa subsp. fastidiosa strain CFBP8351 |
Toxin (Protein)
Gene name | mqsR | Uniprot ID | Q87EE2 |
Locus tag | OK118_RS01905 | Protein ID | WP_004090696.1 |
Coordinates | 457960..458262 (+) | Length | 101 a.a. |
Antitoxin (Protein)
Gene name | mqsA | Uniprot ID | Q87EE1 |
Locus tag | OK118_RS01910 | Protein ID | WP_004090697.1 |
Coordinates | 458265..458666 (+) | Length | 134 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OK118_RS01870 (OK118_01870) | 453728..454417 | - | 690 | WP_012382453.1 | contractile injection system protein, VgrG/Pvc8 family | - |
OK118_RS01875 (OK118_01875) | 454347..455318 | - | 972 | WP_011097609.1 | hypothetical protein | - |
OK118_RS01880 (OK118_01880) | 455326..455883 | - | 558 | WP_011097610.1 | phage tail protein I | - |
OK118_RS01885 (OK118_01885) | 455876..456769 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
OK118_RS01890 (OK118_01890) | 456769..457131 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
OK118_RS01895 (OK118_01895) | 457305..457586 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
OK118_RS01900 (OK118_01900) | 457597..457872 | + | 276 | WP_004085172.1 | HigA family addiction module antitoxin | - |
OK118_RS01905 (OK118_01905) | 457960..458262 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin |
OK118_RS01910 (OK118_01910) | 458265..458666 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin |
OK118_RS01915 (OK118_01915) | 458735..459322 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
OK118_RS01920 (OK118_01920) | 459319..459861 | - | 543 | WP_011097613.1 | hypothetical protein | - |
OK118_RS01925 (OK118_01925) | 459837..460358 | - | 522 | WP_011097614.1 | hypothetical protein | - |
OK118_RS01930 (OK118_01930) | 460355..460678 | - | 324 | WP_011097935.1 | hypothetical protein | - |
OK118_RS01935 (OK118_01935) | 460678..460938 | - | 261 | WP_011097616.1 | hypothetical protein | - |
OK118_RS01940 (OK118_01940) | 460956..462830 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
OK118_RS01945 (OK118_01945) | 462827..463459 | - | 633 | WP_011097618.1 | phage portal protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 445903..468736 | 22833 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 101 a.a. Molecular weight: 10948.71 Da Isoelectric Point: 8.0251
>T262311 WP_004090696.1 NZ_CP109894:457960-458262 [Xylella fastidiosa subsp. fastidiosa]
MEKGTSHYKLPVVKALVKAGKVRATATAYQGARELGIKDLTGMCTVVLALTSADFYKSMTTYADHTVFQDVYHAKTASGD
EVYLKLTVIDDVLIVSFKEL
MEKGTSHYKLPVVKALVKAGKVRATATAYQGARELGIKDLTGMCTVVLALTSADFYKSMTTYADHTVFQDVYHAKTASGD
EVYLKLTVIDDVLIVSFKEL
Download Length: 303 bp
Antitoxin
Download Length: 134 a.a. Molecular weight: 14944.02 Da Isoelectric Point: 7.1650
>AT262311 WP_004090697.1 NZ_CP109894:458265-458666 [Xylella fastidiosa subsp. fastidiosa]
MRCPCCGAAELIHDTRDMLYTYKSETTSIPTVTGDFCPACGEVVLDREHGDRYSELVGLFQRQVNSAYVDPGYITKVRRK
LDLDQRQAAELFGGGVNAFSRYENGKTKPPLSLVKLFKLLDRHPDLLNEVKSS
MRCPCCGAAELIHDTRDMLYTYKSETTSIPTVTGDFCPACGEVVLDREHGDRYSELVGLFQRQVNSAYVDPGYITKVRRK
LDLDQRQAAELFGGGVNAFSRYENGKTKPPLSLVKLFKLLDRHPDLLNEVKSS
Download Length: 402 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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