Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 983722..984422 Replicon chromosome
Accession NZ_CP109603
Organism Pseudomonas putida strain SEH01

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag OGV19_RS04460 Protein ID WP_264312310.1
Coordinates 983722..984018 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag OGV19_RS04465 Protein ID WP_264312311.1
Coordinates 984021..984422 (+) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OGV19_RS04440 979711..980880 - 1170 WP_264312306.1 efflux RND transporter periplasmic adaptor subunit -
OGV19_RS04445 981106..981582 + 477 WP_264312307.1 sigma-70 family RNA polymerase sigma factor -
OGV19_RS04450 981753..982232 + 480 WP_264312308.1 histidine kinase -
OGV19_RS04455 982302..983627 + 1326 WP_264312309.1 MFS transporter -
OGV19_RS04460 983722..984018 + 297 WP_264312310.1 type II toxin-antitoxin system MqsR family toxin Toxin
OGV19_RS04465 984021..984422 + 402 WP_264312311.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
OGV19_RS04470 984495..986177 - 1683 WP_264312312.1 electron transfer flavoprotein-ubiquinone oxidoreductase -
OGV19_RS04475 986716..987465 + 750 WP_027592887.1 electron transfer flavoprotein subunit beta/FixA family protein -
OGV19_RS04480 987466..988395 + 930 WP_264312313.1 FAD-binding protein -
OGV19_RS04485 988486..989307 + 822 WP_264312314.1 transporter substrate-binding domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Antitoxin MqsA/HigA-2

(1-131)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11222.09 Da        Isoelectric Point: 8.0063

>T261878 WP_264312310.1 NZ_CP109603:983722-984018 [Pseudomonas putida]
MEKRTPHCPLELIRALVGAGRISPTTASLRGAQALGMEYPDMLDVINGLERRDFYKSMTSYVDHRVWQDVYRPLTVKGYV
YLKLSVVDDVLIVSFKEM

Download         Length: 297 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14627.64 Da        Isoelectric Point: 5.2321

>AT261878 WP_264312311.1 NZ_CP109603:984021-984422 [Pseudomonas putida]
MRCPICGGAELAPDTQDMPYRYKGEATLIPNVSGDYCSACGEAVLSHDEAMRISDLMSAFNRQVNAAAVDPGFIVSVRKK
FDLDQREAGEIFGGGVNAFSRYENGKTRPPVALVKLFKLLDRHPELFEEVRTA

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References