Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) higBA (relBE)/HigB-HigA
Location 56133..56860 Replicon plasmid unnamed1
Accession NZ_CP107321
Organism Klebsiella pneumoniae strain CRKP_40

Toxin (Protein)


Gene name higB Uniprot ID A0A7W3D9W1
Locus tag OH527_RS27260 Protein ID WP_011251285.1
Coordinates 56133..56444 (+) Length 104 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag OH527_RS27265 Protein ID WP_011251286.1
Coordinates 56441..56860 (+) Length 140 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH527_RS27230 52633..52863 + 231 WP_011154571.1 hypothetical protein -
OH527_RS27235 53146..53310 - 165 Protein_64 Tn3 family transposase -
OH527_RS27240 53448..53927 + 480 WP_004212799.1 cyclophilin-like fold protein -
OH527_RS27245 53924..54724 + 801 WP_228722687.1 aldo/keto reductase -
OH527_RS27255 55491..55928 + 438 Protein_68 DDE-type integrase/transposase/recombinase -
OH527_RS27260 56133..56444 + 312 WP_011251285.1 type II toxin-antitoxin system HigB family toxin Toxin
OH527_RS27265 56441..56860 + 420 WP_011251286.1 helix-turn-helix domain-containing protein Antitoxin
OH527_RS27270 57007..57975 + 969 WP_074428168.1 IS5 family transposase -
OH527_RS27275 58047..58412 - 366 WP_048333448.1 hypothetical protein -
OH527_RS27280 58426..59214 - 789 WP_040217257.1 hypothetical protein -
OH527_RS27285 59235..59855 - 621 WP_223175004.1 conjugative transfer protein MobI(A/C) -
OH527_RS27290 60274..60909 + 636 WP_223171879.1 hypothetical protein -
OH527_RS27295 61222..61692 + 471 WP_048333570.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Mobilizable plasmid - rmpA / rmpA / iroN / rmpA2 / iutA / iucD / iucC / iucB / iucA 1..193826 193826
- inside IScluster/Tn - - 54659..74615 19956


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.



Sequences


Toxin        


Download         Length: 104 a.a.        Molecular weight: 12346.12 Da        Isoelectric Point: 9.7248

>T260764 WP_011251285.1 NZ_CP107321:56133-56444 [Klebsiella pneumoniae]
MHVISKEPFEEAAKRYPNDSLAIRALYRLVRETDFSSPAEMLTLIPSLDNFKYRNKWWVLDVGGNNLRVIAYINFVNKRF
YVKHIATHADYDKLTRYYRENKE

Download         Length: 312 bp


Antitoxin


Download         Length: 140 a.a.        Molecular weight: 15377.46 Da        Isoelectric Point: 4.4420

>AT260764 WP_011251286.1 NZ_CP107321:56441-56860 [Klebsiella pneumoniae]
MITDTAKAIEATKQLVAAVPFLGGSSSESDYREAMELVDYLIENDDENPLIDFLASKIADYEDNSPRFAEFNKAIAEIPV
GVALLRTLIDQHKLSYSDLKDEIGSKSLVSQILSGQRSLTITHIKALSARFGVKPEWFL

Download         Length: 420 bp


Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A7W3D9W1


Antitoxin

Source ID Structure

References