Detailed information of TA system TA260462

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): txpA-ratA/-
• Location: 506712..507037
• Replicon: chromosome
• Accession: NZ_CP107039
• Organism: Bacillus subtilis strain 11060

Toxin (Protein)

• Gene name: txpA
• Uniprot ID: -
• Locus tag: ODQ18_RS02755
• Protein ID: WP_128751232.1
• Coordinates: 506858..507037 (-)
• Length: 60 a.a.

Antitoxin (RNA)

Gene name	ratA
Locus tag	-
Coordinates	506712..506934 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
ODQ18_RS02710 (502081)	502081..502392	+	312	WP_003229923.1	YqbF domain-containing protein	-
ODQ18_RS02715 (502396)	502396..502791	+	396	WP_004398566.1	DUF3199 family protein	-
ODQ18_RS02720 (502788)	502788..503150	+	363	WP_003229925.1	YqbH/XkdH family protein	-
ODQ18_RS02725 (503147)	503147..503650	+	504	WP_003246050.1	HK97 gp10 family phage protein	-
ODQ18_RS02730 (503663)	503663..504100	+	438	WP_003229927.1	hypothetical protein	-
ODQ18_RS02735 (504097)	504097..504288	+	192	WP_010886574.1	hypothetical protein	-
ODQ18_RS02740 (504289)	504289..505689	+	1401	WP_003229929.1	phage tail sheath family protein	-
ODQ18_RS02745 (505692)	505692..506135	+	444	WP_003229930.1	phage tail tube protein	-
ODQ18_RS02750 (506389)	506389..506478	-	90	WP_075058862.1	type I toxin-antitoxin system toxin BsrH	-
- (506712)	506712..506934	+	223	NuclAT_0	-	Antitoxin
- (506712)	506712..506934	+	223	NuclAT_0	-	Antitoxin
- (506712)	506712..506934	+	223	NuclAT_0	-	Antitoxin
- (506712)	506712..506934	+	223	NuclAT_0	-	Antitoxin
ODQ18_RS02755 (506858)	506858..507037	-	180	WP_128751232.1	type I toxin-antitoxin system toxin TxpA	Toxin
ODQ18_RS02760 (507183)	507183..507632	+	450	WP_032722171.1	phage portal protein	-
ODQ18_RS02765 (507674)	507674..507811	+	138	WP_021480099.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	486034..547737	61703

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 60 a.a.
• Molecular weight: 6755.19 Da
• Isoelectric Point: 8.0288

>T260462 WP_128751232.1 NZ_CP107039:c507037-506858 [Bacillus subtilis]
MSTYESLMVMIGFANLIGGIMTWVISLLTLLYMLRKKDTHPIYITVKEKCLHEDPPIKG

Nucleotide

• Length: 180 bp

Antitoxin

Nucleotide

• Length: 223 bp

>AT260462 NZ_CP107039:506712-506934 [Bacillus subtilis]
CAAGCAAAAGTATTGCAACTACTGGCGTAAGCTTATAGTTGGTACCACATTACCACATTACCACTTGTTAATGTGTGTTA
CTTTCATGAGAAATGCTAAAATATAAAAGCCAGAGTGTGGCAGCACTCTAGCTTTTAAAAAAGAAACTACCCTTTAATAG
GAGGGTCCTCGTGTAGACACTTTTCCTTTACAGTAATGTAAATAGGATGAGTGTCTTTTTTTC

Structures

Antitoxin