Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | DinJ-YafQ (relBE)/YafQ-RelB |
Location | 3759712..3760253 | Replicon | chromosome |
Accession | NZ_CP107002 | ||
Organism | Escherichia coli strain SY22C3 |
Toxin (Protein)
Gene name | yafQ | Uniprot ID | Q47149 |
Locus tag | OFB02_RS18520 | Protein ID | WP_000615983.1 |
Coordinates | 3759975..3760253 (+) | Length | 93 a.a. |
Antitoxin (Protein)
Gene name | dinJ | Uniprot ID | Q47150 |
Locus tag | OFB02_RS18515 | Protein ID | WP_000729703.1 |
Coordinates | 3759712..3759972 (+) | Length | 87 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OFB02_RS18495 (3755387) | 3755387..3756172 | - | 786 | WP_000207552.1 | putative lateral flagellar export/assembly protein LafU | - |
OFB02_RS18500 (3756144) | 3756144..3757856 | + | 1713 | Protein_3619 | flagellar biosynthesis protein FlhA | - |
OFB02_RS18505 (3758080) | 3758080..3758577 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
OFB02_RS18510 (3758753) | 3758753..3759502 | - | 750 | WP_000056849.1 | C40 family peptidase | - |
OFB02_RS18515 (3759712) | 3759712..3759972 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin |
OFB02_RS18520 (3759975) | 3759975..3760253 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin |
OFB02_RS18525 (3760409) | 3760409..3761149 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
OFB02_RS18530 (3761120) | 3761120..3761887 | - | 768 | WP_012305459.1 | class II glutamine amidotransferase | - |
OFB02_RS18535 (3762093) | 3762093..3762671 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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