Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 1163023..1163696 Replicon chromosome
Accession NZ_CP106785
Organism Pseudomonas tohonis strain G5.110

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag N9L84_RS05500 Protein ID WP_263154402.1
Coordinates 1163427..1163696 (-) Length 90 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag N9L84_RS05495 Protein ID WP_263152831.1
Coordinates 1163023..1163424 (-) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N9L84_RS05470 (N9L84_05470) 1158596..1158853 - 258 WP_263152822.1 hypothetical protein -
N9L84_RS05475 (N9L84_05475) 1159302..1159778 - 477 WP_263152823.1 hypothetical protein -
N9L84_RS05480 (N9L84_05480) 1159765..1160163 - 399 WP_263152825.1 hypothetical protein -
N9L84_RS05485 (N9L84_05485) 1160227..1161408 - 1182 WP_263152827.1 hypothetical protein -
N9L84_RS05490 (N9L84_05490) 1161423..1162538 - 1116 WP_263152829.1 nucleoid-associated protein -
N9L84_RS05495 (N9L84_05495) 1163023..1163424 - 402 WP_263152831.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
N9L84_RS05500 (N9L84_05500) 1163427..1163696 - 270 WP_263154402.1 type II toxin-antitoxin system MqsR family toxin Toxin
N9L84_RS05505 (N9L84_05505) 1163797..1164750 - 954 WP_263152832.1 tyrosine-type recombinase/integrase -
N9L84_RS05510 (N9L84_05510) 1164740..1165594 - 855 WP_263152834.1 hypothetical protein -
N9L84_RS05515 (N9L84_05515) 1165597..1166346 - 750 WP_263152836.1 IS21-like element helper ATPase IstB -
N9L84_RS05520 (N9L84_05520) 1166339..1167883 - 1545 WP_263152838.1 IS21 family transposase -
N9L84_RS05525 (N9L84_05525) 1168149..1168451 - 303 WP_263152840.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(4-88)

Antitoxin

Antitoxin MqsA/HigA-2

(1-131)


Sequences

Toxin        


Download         Length: 90 a.a.        Molecular weight: 9540.00 Da        Isoelectric Point: 4.6062

>T259803 WP_263154402.1 NZ_CP106785:c1163696-1163427 [Pseudomonas tohonis]
MTVVKALVAAGNVRSTMSALTGGAALGFDFEGIVGVVMALAPADFYKSMTTHADHTVWQDVYRTNTEAGEVYLKLTVIDD
VLIVSFKEL

Download         Length: 270 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14366.45 Da        Isoelectric Point: 7.0826

>AT259803 WP_263152831.1 NZ_CP106785:c1163424-1163023 [Pseudomonas tohonis]
MKCPSCAAAELVHDTRDLPYTYKNESTTIPAVTGDFCPACGEAVLDAGESTRVSTAMLGFNKQVNASIVDPSFIANVRKK
LALDQREAAEIFGGGVNAFSRYENGKTKPPLALVKLLKVLDRHPELLNEVRTA

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References