Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 1432088..1432788 Replicon chromosome
Accession NZ_CP104727
Organism Pseudomonas citronellolis strain G5.80

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag N5P21_RS06370 Protein ID WP_261747736.1
Coordinates 1432088..1432384 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag N5P21_RS06375 Protein ID WP_261747737.1
Coordinates 1432387..1432788 (+) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N5P21_RS06340 (N5P21_06340) 1428334..1429218 - 885 WP_009615988.1 methylisocitrate lyase -
N5P21_RS06345 (N5P21_06345) 1429215..1429937 - 723 WP_074985029.1 GntR family transcriptional regulator -
N5P21_RS06350 (N5P21_06350) 1430133..1430744 + 612 WP_058070652.1 class I SAM-dependent methyltransferase -
N5P21_RS06355 (N5P21_06355) 1430752..1430991 - 240 WP_009615991.1 hypothetical protein -
N5P21_RS06360 (N5P21_06360) 1431167..1431397 - 231 WP_009615992.1 hypothetical protein -
N5P21_RS06365 (N5P21_06365) 1431509..1431961 - 453 WP_069863417.1 hypothetical protein -
N5P21_RS06370 (N5P21_06370) 1432088..1432384 + 297 WP_261747736.1 type II toxin-antitoxin system MqsR family toxin Toxin
N5P21_RS06375 (N5P21_06375) 1432387..1432788 + 402 WP_261747737.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
N5P21_RS06380 (N5P21_06380) 1433023..1434351 - 1329 WP_261747738.1 sigma-54 dependent transcriptional regulator -
N5P21_RS06385 (N5P21_06385) 1434348..1436234 - 1887 WP_261747739.1 sensor histidine kinase -
N5P21_RS06390 (N5P21_06390) 1436406..1437140 - 735 WP_009615999.1 amino acid ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Cro/C1-type helix-turn-helix domain

(74-109)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 10898.63 Da        Isoelectric Point: 8.9848

>T259067 WP_261747736.1 NZ_CP104727:1432088-1432384 [Pseudomonas citronellolis]
MEKSTPHCRLDRVKSLLAQGRVRATYSALSGGAALGLDFADMLAVIEALAPRDFHKSMTTHADHRVWQDVYRPSTAVGRI
YLKLTVIDDVLVVSFKEL

Download         Length: 297 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14417.65 Da        Isoelectric Point: 7.0843

>AT259067 WP_261747737.1 NZ_CP104727:1432387-1432788 [Pseudomonas citronellolis]
MKCPLCGGAELLHETRDLPYAYKGESTLITGVRGEFCPACGEAVLDADESARVSAQMLAFNKRVNASMVDPGFIAAVRKK
LALDQREAAEIFGGGVNAFSRYENGKTRPPLALVKLLKVLDRHPELLEEVRAG

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References