Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-YefM |
Location | 1790826..1791328 | Replicon | chromosome |
Accession | NZ_CP104328 | ||
Organism | Escherichia coli strain THB42-F2 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | U9YDH0 |
Locus tag | N0499_RS08500 | Protein ID | WP_000767829.1 |
Coordinates | 1791074..1791328 (+) | Length | 85 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | S1Q063 |
Locus tag | N0499_RS08495 | Protein ID | WP_001259255.1 |
Coordinates | 1790826..1791077 (+) | Length | 84 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
N0499_RS08470 (1786004) | 1786004..1787071 | - | 1068 | WP_000080105.1 | bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB | - |
N0499_RS08475 (1787071) | 1787071..1788141 | - | 1071 | WP_000108941.1 | histidinol-phosphate transaminase | - |
N0499_RS08480 (1788138) | 1788138..1789442 | - | 1305 | WP_000009594.1 | histidinol dehydrogenase | - |
N0499_RS08485 (1789448) | 1789448..1790347 | - | 900 | WP_000131782.1 | ATP phosphoribosyltransferase | - |
N0499_RS08490 (1790493) | 1790493..1790543 | - | 51 | WP_001364200.1 | his operon leader peptide | - |
N0499_RS08495 (1790826) | 1790826..1791077 | + | 252 | WP_001259255.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin |
N0499_RS08500 (1791074) | 1791074..1791328 | + | 255 | WP_000767829.1 | type II toxin-antitoxin system mRNA interferase toxin YoeB | Toxin |
N0499_RS08505 (1791411) | 1791411..1792235 | + | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
N0499_RS08510 (1792281) | 1792281..1793210 | + | 930 | WP_000803351.1 | LysR substrate-binding domain-containing protein | - |
N0499_RS08515 (1793425) | 1793425..1793487 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
N0499_RS08520 (1793477) | 1793477..1794835 | + | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
N0499_RS08525 (1795014) | 1795014..1796072 | + | 1059 | WP_000492339.1 | thiosulfate utilization transporter TsuA/YeeE | - |
N0499_RS08530 (1796086) | 1796086..1796313 | + | 228 | WP_000234896.1 | sulfurtransferase TusA | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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