Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 3047073..3047781 Replicon chromosome
Accession NZ_CP103872
Organism Herbaspirillum huttiense strain ZXN111

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag NY669_RS13670 Protein ID WP_259432353.1
Coordinates 3047476..3047781 (-) Length 102 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag NY669_RS13665 Protein ID WP_034330622.1
Coordinates 3047073..3047474 (-) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NY669_RS13645 (NY669_13645) 3042591..3043784 + 1194 WP_259432350.1 NO-inducible flavohemoprotein -
NY669_RS13650 (NY669_13650) 3044000..3044356 + 357 WP_259432351.1 hypothetical protein -
NY669_RS13655 (NY669_13655) 3044357..3045355 - 999 WP_259432352.1 2-hydroxyacid dehydrogenase -
NY669_RS13660 (NY669_13660) 3045697..3046983 + 1287 WP_034330623.1 MFS transporter -
NY669_RS13665 (NY669_13665) 3047073..3047474 - 402 WP_034330622.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
NY669_RS13670 (NY669_13670) 3047476..3047781 - 306 WP_259432353.1 type II toxin-antitoxin system MqsR family toxin Toxin
NY669_RS13675 (NY669_13675) 3048120..3050348 + 2229 WP_121045616.1 NADP-dependent isocitrate dehydrogenase -
NY669_RS13680 (NY669_13680) 3050620..3051492 - 873 WP_259432354.1 ethanolamine ammonia-lyase subunit EutC -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-100)

Antitoxin

Cro/C1-type helix-turn-helix domain

(74-127)


Sequences

Toxin        


Download         Length: 102 a.a.        Molecular weight: 11182.08 Da        Isoelectric Point: 8.1706

>T256878 WP_259432353.1 NZ_CP103872:c3047781-3047476 [Herbaspirillum huttiense]
MEKHTAHCKLPLLRSLIESGRVRVTATTAFQGARACGIDDLEGICAVILGLSVRDFHKSMTTHADHRIWQDVCHPRLASG
VKVYLKLSVVDDVLVVSFKEL

Download         Length: 306 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14966.11 Da        Isoelectric Point: 8.0154

>AT256878 WP_034330622.1 NZ_CP103872:c3047474-3047073 [Herbaspirillum huttiense]
MKCPCCGAAELVRETRNLPYTYKGQSTLIEAVTGDFCPACGEVLLDREHGDRYSAQIGKFQRTVNATYVDPAYITRVRRK
LDLDQREAAELFGGGVNAFSRYENGKAKPPLSLVKLFRLLDRHPDLLEEIRTA

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References