253412

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type III Classification (family/domain) cptIN/-
Location 2846697..2847283 Replicon chromosome
Accession NZ_CP102282
Organism Eubacterium ventriosum strain ATCC 27560

Toxin (Protein)


Gene name cptN Uniprot ID A5Z5E0
Locus tag NQ558_RS13085 Protein ID WP_005362306.1
Coordinates 2846795..2847283 (+) Length 163 a.a.

Antitoxin (RNA)


Gene name cptI
Locus tag -
Coordinates 2846697..2846742 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NQ558_RS13065 (2842536) 2842536..2842910 - 375 WP_005362296.1 hypothetical protein -
NQ558_RS13070 (2842928) 2842928..2843620 - 693 WP_005362298.1 DUF4405 domain-containing protein -
NQ558_RS13075 (2843779) 2843779..2844669 - 891 WP_005362300.1 LysR family transcriptional regulator -
NQ558_RS13080 (2844713) 2844713..2846506 - 1794 WP_005362302.1 recombinase family protein -
- (2846697) 2846697..2846742 + 46 NuclAT_0 - Antitoxin
- (2846697) 2846697..2846742 + 46 NuclAT_0 - Antitoxin
NQ558_RS13085 (2846795) 2846795..2847283 + 489 WP_005362306.1 type III toxin-antitoxin system ToxN/AbiQ family toxin Toxin
NQ558_RS13090 (2847323) 2847323..2847457 - 135 WP_004844681.1 hypothetical protein -
NQ558_RS13095 (2847708) 2847708..2849954 + 2247 WP_005362309.1 tetratricopeptide repeat protein -
NQ558_RS13100 (2849992) 2849992..2850864 - 873 WP_005362311.1 ATP-binding cassette domain-containing protein -
NQ558_RS13105 (2850868) 2850868..2851524 - 657 WP_242652140.1 transporter -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 163 a.a.        Molecular weight: 19191.15 Da        Isoelectric Point: 9.4265

>T253412 WP_005362306.1 NZ_CP102282:2846795-2847283 [Eubacterium ventriosum]
MIYQEGYVYHIKDEYFEKVRDSNLMQNKEGGTYRPTFYCLRDNKTSLLWMVPLSSRVEKFKAIHDKQVAKYGKCLTIVLG
EFDGKEAAFLLQNMFPIRDYYLDHIHTRNNNPVPVKHSIHREVTTHMKKIRQLHSRGKKVVFPDIDRLEQIMLAEVKDNA
TE

Download         Length: 489 bp

Antitoxin


Download         Length: 46 bp

>AT253412 NZ_CP102282:2846697-2846742 [Eubacterium ventriosum]
TCGAAAATATTGTTCGCTCACCGGAAGCGTCTAATAAATGTCCGGC

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A5Z5E0

Antitoxin

Download structure file

References